RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 SNX10Q9Y5X0 201 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 IGLV3-10A0A075B6K4 115 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 CPED1A4D0V7 1026 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 B8ZZF3 427 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 K7ENP7 123 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 TPP1O14773 563 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 AQP9O43315 295 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 AP1G1O43747 822 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 ENDOD1O94919 500 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 TFE3P19532 575 aaPredicted RBP13.82□□□□□ -0.2
SS18-222ENST00000582792 OR1E1P30953 314 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 ZNF165P49910 485 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 NCAPHQ15003 741 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 MAN2A1Q16706 1144 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 PTPN20Q4JDL3 420 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 ARTNQ5T4W7 220 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 ACBD5Q5T8D3 534 aaPredicted RBP13.82□□□□□ -0.2
SS18-222ENST00000582792 RETSATQ6NUM9 610 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 INO80CQ6PI98 192 aaPredicted RBP13.82□□□□□ -0.2
SS18-222ENST00000582792 LRRC31Q6UY01 552 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 RBM44Q6ZP01 1051 aaKnown RBP13.82□□□□□ -0.2
SS18-222ENST00000582792 EFL1Q7Z2Z2 1120 aaKnown RBP13.82□□□□□ -0.2
SS18-222ENST00000582792 PCDH20Q8N6Y1 951 aaKnown RBP13.82□□□□□ -0.2
SS18-222ENST00000582792 OR7D4Q8NG98 312 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 TPCN2Q8NHX9 752 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 SHC3Q92529 594 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 NT5C3BQ969T7 300 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 PGAP3Q96FM1 320 aaPredicted RBP13.82□□□□□ -0.2
SS18-222ENST00000582792 PRR11Q96HE9 360 aaPredicted RBP13.82□□□□□ -0.2
SS18-222ENST00000582792 C1orf74Q96LT6 269 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 KLF6Q99612 283 aaPredicted RBP13.82□□□□□ -0.2
SS18-222ENST00000582792 HEPHQ9BQS7 1158 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 SAMSN1Q9NSI8 373 aaKnown RBP13.82□□□□□ -0.2
SS18-222ENST00000582792 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.82□□□□□ -0.2
SS18-222ENST00000582792 MPP6Q9NZW5 540 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 APEX2Q9UBZ4 518 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 IPO11Q9UI26 975 aaKnown RBP13.82□□□□□ -0.2
SS18-222ENST00000582792 KLF15Q9UIH9 416 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 STAP1Q9ULZ2 295 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 PAXBP1Q9Y5B6 917 aa13.82□□□□□ -0.2
SS18-222ENST00000582792 ILVBLA1L0T0 632 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 GTPBP10A4D1E9 387 aaKnown RBP13.81□□□□□ -0.2
SS18-222ENST00000582792 LRRC10BA6NIK2 292 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 CDRT15L2A8MXV6 281 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 FPGTO14772 594 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 TCEA3O75764 348 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 ZMPSTE24O75844 475 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 F9P00740 461 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 JUNDP17535 347 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 SLC9A1P19634 815 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 MTIF2P46199 727 aaKnown RBP13.81□□□□□ -0.2
SS18-222ENST00000582792 SULT1E1P49888 294 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 SERPINH1P50454 418 aaKnown RBP13.81□□□□□ -0.2
SS18-222ENST00000582792 CCNHP51946 323 aaPredicted RBP13.81□□□□□ -0.2
SS18-222ENST00000582792 PTK2Q05397 1052 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 DEUP1Q05D60 604 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 SLC20A2Q08357 652 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 PDE1CQ14123 709 aaPredicted RBP13.81□□□□□ -0.2
SS18-222ENST00000582792 IQCB1Q15051 598 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 NR0B2Q15466 257 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 DEFB133Q30KQ1 61 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 CARD16Q5EG05 197 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 TCP11X2Q5H9J9 407 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 TPRG1LQ5T0D9 272 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 ZNF783Q6ZMS7 281 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 PARS2Q7L3T8 475 aaKnown RBP13.81□□□□□ -0.2
SS18-222ENST00000582792 ZDHHC17Q8IUH5 632 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 LMX1AQ8TE12 382 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 BTN2A2Q8WVV5 523 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 MED8Q96G25 268 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 IL12RB2Q99665 862 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 SPON2Q9BUD6 331 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.81□□□□□ -0.2
SS18-222ENST00000582792 C1QTNF2Q9BXJ5 285 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 SYNCQ9H7C4 482 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 ZNF212Q9UDV6 495 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 HECTD1Q9ULT8 2610 aa13.81□□□□□ -0.2
SS18-222ENST00000582792 DOCK4Q8N1I0 1966 aa13.8□□□□□ -0.2
SS18-222ENST00000582792 IGLON5A6NGN9 336 aa13.8□□□□□ -0.2
SS18-222ENST00000582792 SPINT1O43278 529 aa13.8□□□□□ -0.2
SS18-222ENST00000582792 KRT9P35527 623 aa13.8□□□□□ -0.2
SS18-222ENST00000582792 MLLT3P42568 568 aaPredicted RBP13.8□□□□□ -0.2
SS18-222ENST00000582792 PFN3P60673 137 aa13.8□□□□□ -0.2
SS18-222ENST00000582792 APBA1Q02410 837 aa13.8□□□□□ -0.2
SS18-222ENST00000582792 EIF2B5Q13144 721 aaKnown RBP13.8□□□□□ -0.2
SS18-222ENST00000582792 SGCGQ13326 291 aa13.8□□□□□ -0.2
SS18-222ENST00000582792 PERM1Q5SV97 790 aa13.8□□□□□ -0.2
SS18-222ENST00000582792 CRTC1Q6UUV9 634 aa13.8□□□□□ -0.2
SS18-222ENST00000582792 GBP6Q6ZN66 633 aa13.8□□□□□ -0.2
SS18-222ENST00000582792 CLEC14AQ86T13 490 aa13.8□□□□□ -0.2
SS18-222ENST00000582792 ARL14Q8N4G2 192 aa13.8□□□□□ -0.2
SS18-222ENST00000582792 AOPEPQ8N6M6 819 aa13.8□□□□□ -0.2
SS18-222ENST00000582792 DENND6BQ8NEG7 585 aa13.8□□□□□ -0.2
SS18-222ENST00000582792 ANKRD20A12PQ8NF67 263 aa13.8□□□□□ -0.2
SS18-222ENST00000582792 ASB12Q8WXK4 309 aa13.8□□□□□ -0.2
SS18-222ENST00000582792 TBCBQ99426 244 aa13.8□□□□□ -0.2
SS18-222ENST00000582792 TUBGCP2Q9BSJ2 902 aa13.8□□□□□ -0.2
SS18-222ENST00000582792 BOCQ9BWV1 1114 aa13.8□□□□□ -0.2
SS18-222ENST00000582792 ATP13A1Q9HD20 1204 aa13.8□□□□□ -0.2
SS18-222ENST00000582792 TMPRSS4Q9NRS4 437 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms