RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 TMEM51Q9NW97 253 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 TMEM248Q9NWD8 314 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 SUSD2Q9UGT4 822 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 FZD4Q9ULV1 537 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 CAPN11Q9UMQ6 739 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 ANKRD6Q9Y2G4 727 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 NCOR2Q9Y618 2525 aa9.9□□□□□ -0.83
TOP3A-211ENST00000581536 A0A1W2PPC4 97 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 A0A1W2PQJ5 194 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 LRRC72A6NJI9 287 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 ERVH48-1M5A8F1 160 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 KPNA3O00505 521 aaPredicted RBP9.89□□□□□ -0.83
TOP3A-211ENST00000581536 KDELR3O43731 214 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 LEFTY1O75610 366 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 GYPCP04921 128 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 CEACAM1P13688 526 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 TCF4P15884 667 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 SPINK2P20155 84 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 CSRP1P21291 193 aaKnown RBP9.89□□□□□ -0.83
TOP3A-211ENST00000581536 PSMA2P25787 234 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 EPHB2P29323 1055 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 CASP14P31944 242 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 TPM4P67936 248 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 SCAPQ12770 1279 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 NFKBIBQ15653 356 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 SKOR2Q2VWA4 1001 aaPredicted RBP9.89□□□□□ -0.83
TOP3A-211ENST00000581536 CARD16Q5EG05 197 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 AGBL4Q5VU57 503 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 C22orf39Q6P5X5 142 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 ZNF783Q6ZMS7 281 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 CYP4V2Q6ZWL3 525 aaPredicted RBP9.89□□□□□ -0.83
TOP3A-211ENST00000581536 OR6K2Q8NGY2 324 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 FAM131CQ96AQ9 280 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 ZNF653Q96CK0 615 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 ZFAND3Q9H8U3 227 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 IL36AQ9UHA7 158 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 CA5BQ9Y2D0 317 aa9.89□□□□□ -0.83
TOP3A-211ENST00000581536 FNDC3AQ9Y2H6 1198 aaKnown RBP9.89□□□□□ -0.83
TOP3A-211ENST00000581536 ARID1BQ8NFD5 2236 aaPredicted RBP9.88□□□□□ -0.83
TOP3A-211ENST00000581536 ASPMQ8IZT6 3477 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 A0A087X0T9 212 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 A0A1W2PR77 199 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 ANKRD62A6NC57 917 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 C1QTNF3-AMACRE9PGA6 284 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 H0Y8X5 98 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 PLRG1O43660 514 aaKnown RBP9.88□□□□□ -0.83
TOP3A-211ENST00000581536 RNGTTO60942 597 aaKnown RBP9.88□□□□□ -0.83
TOP3A-211ENST00000581536 SERPING1P05155 500 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 FAM228BP0C875 321 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 ITIH2P19823 946 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 PTMSP20962 102 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 MIPP30301 263 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 MAPKAPK2P49137 400 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 SERPINH1P50454 418 aaKnown RBP9.88□□□□□ -0.83
TOP3A-211ENST00000581536 CCR5P51681 352 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 AFF3P51826 1226 aaKnown RBP9.88□□□□□ -0.83
TOP3A-211ENST00000581536 RAB15P59190 212 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 ZBED6P86452 979 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 IL9RQ01113 521 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 SLC20A2Q08357 652 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 SFSWAPQ12872 951 aaKnown RBP9.88□□□□□ -0.83
TOP3A-211ENST00000581536 EFHC2Q5JST6 749 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 ATXN7L2Q5T6C5 722 aaPredicted RBP9.88□□□□□ -0.83
TOP3A-211ENST00000581536 ERMARDQ5T6L9 678 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 PIP5KL1Q5T9C9 394 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 FAM46CQ5VWP2 391 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 TXNRD3NBQ6F5E7 133 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 RETSATQ6NUM9 610 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 DSG4Q86SJ6 1040 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 CPNE8Q86YQ8 564 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 TP53INP2Q8IXH6 220 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 RNF214Q8ND24 703 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 TMIEQ8NEW7 156 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 GRIN3AQ8TCU5 1115 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 ARHGEF26Q96DR7 871 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 HMCESQ96FZ2 354 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 CELF6Q96J87 481 aaKnown RBP9.88□□□□□ -0.83
TOP3A-211ENST00000581536 CNTNAP3BQ96NU0 1288 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 CNTNAP3Q9BZ76 1288 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 TM6SF2Q9BZW4 377 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 THAP2Q9H0W7 228 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 MAGEH1Q9H213 219 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 DHX35Q9H5Z1 703 aaKnown RBP9.88□□□□□ -0.83
TOP3A-211ENST00000581536 OSGEPQ9NPF4 335 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 ATP13A2Q9NQ11 1180 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 TM7SF3Q9NS93 570 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 HECAQ9UBI9 543 aaPredicted RBP9.88□□□□□ -0.83
TOP3A-211ENST00000581536 AP4E1Q9UPM8 1137 aa9.88□□□□□ -0.83
TOP3A-211ENST00000581536 LUC7L2Q9Y383 392 aaKnown RBP9.88□□□□□ -0.83
TOP3A-211ENST00000581536 WASH4PA8MWX3 477 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 UPK3BL1B0FP48 263 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 RASA4BC9J798 803 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 UPK3BL2E5RIL1 263 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 J3KR12 359 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 ALOX15BO15296 676 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 SLC31A1O15431 190 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 INSIG1O15503 277 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 RASA4O43374 803 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 BUB1O43683 1085 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 RAMP2O60895 175 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms