RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 NUDCD1Q96RS6 583 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 TUBGCP5Q96RT8 1024 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 CINPQ9BW66 212 aaPredicted RBP10.56□□□□□ -0.72
CCDC47-203ENST00000580986 CPEB1Q9BZB8 566 aaKnown RBP10.56□□□□□ -0.72
CCDC47-203ENST00000580986 L2HGDHQ9H9P8 463 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 LHX3Q9UBR4 397 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 MTF2Q9Y483 593 aaPredicted RBP10.56□□□□□ -0.72
CCDC47-203ENST00000580986 MYO18AQ92614 2054 aaKnown RBP10.56□□□□□ -0.72
CCDC47-203ENST00000580986 A0A1W2PQ67 120 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 A0A1W2PQF6 199 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 RNF103O00237 685 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 PDE2AO00408 941 aaPredicted RBP10.55□□□□□ -0.72
CCDC47-203ENST00000580986 KCNN4O15554 427 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 SMAD6O43541 496 aaKnown RBP10.55□□□□□ -0.72
CCDC47-203ENST00000580986 SOCS5O75159 536 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 KLF8O95600 359 aaPredicted RBP10.55□□□□□ -0.72
CCDC47-203ENST00000580986 POP4O95707 220 aaKnown RBP10.55□□□□□ -0.72
CCDC47-203ENST00000580986 HOXB2P14652 356 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 HOXA6P31267 233 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 COILP38432 576 aaPredicted RBP10.55□□□□□ -0.72
CCDC47-203ENST00000580986 RECQLP46063 649 aaPredicted RBP10.55□□□□□ -0.72
CCDC47-203ENST00000580986 DGKEP52429 567 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 RHOAP61586 193 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 ZBTB16Q05516 673 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 RAD51Q06609 339 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 ZBTB17Q13105 803 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 DHX34Q14147 1143 aaKnown RBP10.55□□□□□ -0.72
CCDC47-203ENST00000580986 CRY1Q16526 586 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 C2orf27AQ580R0 203 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 CARD16Q5EG05 197 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 C9orf64Q5T6V5 341 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 EMC10Q5UCC4 262 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 ITPRIPL1Q6GPH6 555 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 CCDC137Q6PK04 289 aaKnown RBP10.55□□□□□ -0.72
CCDC47-203ENST00000580986 SYDE1Q6ZW31 735 aaPredicted RBP10.55□□□□□ -0.72
CCDC47-203ENST00000580986 ADAT2Q7Z6V5 191 aaKnown RBP10.55□□□□□ -0.72
CCDC47-203ENST00000580986 DSG4Q86SJ6 1040 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 LAPTM4BQ86VI4 370 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 CAMKK1Q8N5S9 505 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 CNTD1Q8N815 330 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 TXNDC5Q8NBS9 432 aaKnown RBP10.55□□□□□ -0.72
CCDC47-203ENST00000580986 NETO2Q8NC67 525 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 TSEN2Q8NCE0 465 aaKnown RBP10.55□□□□□ -0.72
CCDC47-203ENST00000580986 MNS1Q8NEH6 495 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 TMIEQ8NEW7 156 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 CCHCR1Q8TD31 782 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 HCAR2Q8TDS4 363 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 ZNF592Q92610 1267 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 TADA1Q96BN2 335 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 CAPZA3Q96KX2 299 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 ACOX2Q99424 681 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 TMEM121Q9BTD3 319 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 AP1M1Q9BXS5 423 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 OSBPL1AQ9BXW6 950 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 GBA3Q9H227 469 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 PCDH9Q9HC56 1237 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 VPS45Q9NRW7 570 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 RBM12Q9NTZ6 932 aaKnown RBP10.55□□□□□ -0.72
CCDC47-203ENST00000580986 RBM22Q9NW64 420 aaKnown RBP eCLIP10.55□□□□□ -0.72
CCDC47-203ENST00000580986 CACNA2D2Q9NY47 1150 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 SCML1Q9UN30 329 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 ZNF148Q9UQR1 794 aa10.55□□□□□ -0.72
CCDC47-203ENST00000580986 FCF1Q9Y324 198 aaKnown RBP10.55□□□□□ -0.72
CCDC47-203ENST00000580986 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.54□□□□□ -0.72
CCDC47-203ENST00000580986 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.54□□□□□ -0.72
CCDC47-203ENST00000580986 TTC34A8MYJ7 566 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 K7ERQ8 282 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 SGK1O00141 431 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 SYNCRIPO60506 623 aaKnown RBP10.54□□□□□ -0.72
CCDC47-203ENST00000580986 NEBLO76041 1014 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 GAS8O95995 478 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 JCHAINP01591 159 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 PRNPP04156 253 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 HLA-DQB2P05538 268 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 EPHX1P07099 455 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 ACTN2P35609 894 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 CCR3P51677 355 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 CCNHP51946 323 aaPredicted RBP10.54□□□□□ -0.72
CCDC47-203ENST00000580986 SEC13P55735 322 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 GAS6Q14393 721 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 ACCSLQ4AC99 568 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 ANKRD20A2Q5SQ80 823 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 ANKRD20A1Q5TYW2 823 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 ANKRD20A3Q5VUR7 823 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 Q6ZS52 159 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 Q6ZVU0 165 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 ZNF567Q8N184 647 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 PGBD5Q8N414 524 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 FBXL6Q8N531 539 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 CCDC33Q8N5R6 958 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 CEP112Q8N8E3 955 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 OR2T3Q8NH03 318 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 OR8D1Q8WZ84 308 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 VOPP1Q96AW1 172 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 IMP4Q96G21 291 aaKnown RBP10.54□□□□□ -0.72
CCDC47-203ENST00000580986 ZNF641Q96N77 438 aaPredicted RBP10.54□□□□□ -0.72
CCDC47-203ENST00000580986 FCRL5Q96RD9 977 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 HEPHQ9BQS7 1158 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 COL25A1Q9BXS0 654 aaPredicted RBP10.54□□□□□ -0.72
CCDC47-203ENST00000580986 SLC25A51Q9H1U9 297 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms