RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 DHRS13Q6UX07 377 aa21.65■■□□□ 1.06
CSNK1D-215ENST00000580784 PARS2Q7L3T8 475 aaKnown RBP21.65■■□□□ 1.06
CSNK1D-215ENST00000580784 KANSL1Q7Z3B3 1105 aa21.65■■□□□ 1.06
CSNK1D-215ENST00000580784 ZNF354CQ86Y25 554 aa21.65■■□□□ 1.06
CSNK1D-215ENST00000580784 OR2AP1Q8NGE2 309 aa21.65■■□□□ 1.06
CSNK1D-215ENST00000580784 VOPP1Q96AW1 172 aa21.65■■□□□ 1.06
CSNK1D-215ENST00000580784 VCPIP1Q96JH7 1222 aa21.65■■□□□ 1.06
CSNK1D-215ENST00000580784 KLC2Q9H0B6 622 aa21.65■■□□□ 1.06
CSNK1D-215ENST00000580784 ANKRD11Q6UB99 2663 aaPredicted RBP21.65■■□□□ 1.06
CSNK1D-215ENST00000580784 PKD1L2Q7Z442 2459 aa21.64■■□□□ 1.05
CSNK1D-215ENST00000580784 TAF4O00268 1085 aa21.64■■□□□ 1.05
CSNK1D-215ENST00000580784 SDC3O75056 442 aa21.64■■□□□ 1.05
CSNK1D-215ENST00000580784 AKT2P31751 481 aa21.64■■□□□ 1.05
CSNK1D-215ENST00000580784 MAPK8IP2Q13387 824 aaPredicted RBP21.64■■□□□ 1.05
CSNK1D-215ENST00000580784 MAMLD1Q13495 774 aa21.64■■□□□ 1.05
CSNK1D-215ENST00000580784 FGL2Q14314 439 aa21.64■■□□□ 1.05
CSNK1D-215ENST00000580784 ASIC2Q16515 512 aa21.64■■□□□ 1.05
CSNK1D-215ENST00000580784 MYLK3Q32MK0 819 aa21.64■■□□□ 1.05
CSNK1D-215ENST00000580784 E4F1Q66K89 784 aaPredicted RBP21.64■■□□□ 1.05
CSNK1D-215ENST00000580784 TMC6Q7Z403 805 aa21.64■■□□□ 1.05
CSNK1D-215ENST00000580784 NETO2Q8NC67 525 aa21.64■■□□□ 1.05
CSNK1D-215ENST00000580784 OR13H1Q8NG92 308 aa21.64■■□□□ 1.05
CSNK1D-215ENST00000580784 FEM1CQ96JP0 617 aa21.64■■□□□ 1.05
CSNK1D-215ENST00000580784 EPAS1Q99814 870 aa21.64■■□□□ 1.05
CSNK1D-215ENST00000580784 SLC17A9Q9BYT1 436 aa21.64■■□□□ 1.05
CSNK1D-215ENST00000580784 HAUS4Q9H6D7 363 aa21.64■■□□□ 1.05
CSNK1D-215ENST00000580784 A0A1B0GTH6 734 aa21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 A0A1W2PQC6 194 aa21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 FAM149AA5PLN7 773 aa21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 C16orf96A6NNT2 1141 aa21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 ATMINO43313 823 aaPredicted RBP21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 POP4O95707 220 aaKnown RBP21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 PAK4O96013 591 aaPredicted RBP21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 GSRP00390 522 aa21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 AIF1P55008 147 aa21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 SNRPD1P62314 119 aaKnown RBP21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 RPS21P63220 83 aaKnown RBP21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 IQCB1Q15051 598 aa21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 ZNF805Q5CZA5 627 aa21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 ATXN7L2Q5T6C5 722 aaPredicted RBP21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 GCNT7Q6ZNI0 430 aa21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 ZNF571Q7Z3V5 609 aaPredicted RBP21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 GALNT15Q8N3T1 639 aa21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 HMCESQ96FZ2 354 aa21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 LRIG1Q96JA1 1093 aa21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 FUCA2Q9BTY2 467 aa21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 CALN1Q9BXU9 219 aa21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 CAAP1Q9H8G2 361 aa21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 PARVAQ9NVD7 372 aa21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 GPATCH2LQ9NWQ4 482 aa21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 AIPL1Q9NZN9 384 aa21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 DSPP15924 2871 aaKnown RBP21.63■■□□□ 1.05
CSNK1D-215ENST00000580784 ZSCAN5CA6NGD5 496 aaPredicted RBP21.62■■□□□ 1.05
CSNK1D-215ENST00000580784 RASA4BC9J798 803 aa21.62■■□□□ 1.05
CSNK1D-215ENST00000580784 RASA4O43374 803 aa21.62■■□□□ 1.05
CSNK1D-215ENST00000580784 AP1G1O43747 822 aa21.62■■□□□ 1.05
CSNK1D-215ENST00000580784 TMCC1O94876 653 aa21.62■■□□□ 1.05
CSNK1D-215ENST00000580784 UGT2B4P06133 528 aa21.62■■□□□ 1.05
CSNK1D-215ENST00000580784 ABL2P42684 1182 aa21.62■■□□□ 1.05
CSNK1D-215ENST00000580784 YBEYP58557 167 aaPredicted RBP21.62■■□□□ 1.05
CSNK1D-215ENST00000580784 SMAD1Q15797 465 aaKnown RBP21.62■■□□□ 1.05
CSNK1D-215ENST00000580784 PLEKHA7Q6IQ23 1121 aa21.62■■□□□ 1.05
CSNK1D-215ENST00000580784 KIAA1161Q6NSJ0 714 aa21.62■■□□□ 1.05
CSNK1D-215ENST00000580784 PPP1R2P3Q6NXS1 205 aa21.62■■□□□ 1.05
CSNK1D-215ENST00000580784 BMFQ96LC9 184 aa21.62■■□□□ 1.05
CSNK1D-215ENST00000580784 CATSPERBQ9H7T0 1116 aa21.62■■□□□ 1.05
CSNK1D-215ENST00000580784 GGT7Q9UJ14 662 aa21.62■■□□□ 1.05
CSNK1D-215ENST00000580784 WASH4PA8MWX3 477 aa21.61■■□□□ 1.05
CSNK1D-215ENST00000580784 RAD51BO15315 384 aa21.61■■□□□ 1.05
CSNK1D-215ENST00000580784 FTLP02792 175 aaPredicted RBP21.61■■□□□ 1.05
CSNK1D-215ENST00000580784 DESP17661 470 aa21.61■■□□□ 1.05
CSNK1D-215ENST00000580784 PSMA2P25787 234 aa21.61■■□□□ 1.05
CSNK1D-215ENST00000580784 SERINC3Q13530 473 aa21.61■■□□□ 1.05
CSNK1D-215ENST00000580784 NR1I3Q14994 352 aa21.61■■□□□ 1.05
CSNK1D-215ENST00000580784 Q6ZSR6 202 aa21.61■■□□□ 1.05
CSNK1D-215ENST00000580784 ABI3BPQ7Z7G0 1075 aa21.61■■□□□ 1.05
CSNK1D-215ENST00000580784 PROSER1Q86XN7 944 aa21.61■■□□□ 1.05
CSNK1D-215ENST00000580784 SLC22A18ASQ8N1D0 253 aa21.61■■□□□ 1.05
CSNK1D-215ENST00000580784 UMODL1-AS1Q8N2C9 162 aa21.61■■□□□ 1.05
CSNK1D-215ENST00000580784 SLC25A45Q8N413 288 aa21.61■■□□□ 1.05
CSNK1D-215ENST00000580784 ARFGAP1Q8N6T3 406 aa21.61■■□□□ 1.05
CSNK1D-215ENST00000580784 TSC1Q92574 1164 aa21.61■■□□□ 1.05
CSNK1D-215ENST00000580784 KLHL32Q96NJ5 620 aa21.61■■□□□ 1.05
CSNK1D-215ENST00000580784 TRIM7Q9C029 511 aa21.61■■□□□ 1.05
CSNK1D-215ENST00000580784 TTYH3Q9C0H2 523 aa21.61■■□□□ 1.05
CSNK1D-215ENST00000580784 KLHL11Q9NVR0 708 aa21.61■■□□□ 1.05
CSNK1D-215ENST00000580784 RALYQ9UKM9 306 aaKnown RBP21.61■■□□□ 1.05
CSNK1D-215ENST00000580784 ITM2BQ9Y287 266 aa21.61■■□□□ 1.05
CSNK1D-215ENST00000580784 PCDHGA1Q9Y5H4 931 aa21.61■■□□□ 1.05
CSNK1D-215ENST00000580784 HS3ST3A1Q9Y663 406 aa21.61■■□□□ 1.05
CSNK1D-215ENST00000580784 POM121BA6NF01 834 aa21.6■■□□□ 1.05
CSNK1D-215ENST00000580784 TMEM191CA6NGB0 347 aa21.6■■□□□ 1.05
CSNK1D-215ENST00000580784 IGLON5A6NGN9 336 aa21.6■■□□□ 1.05
CSNK1D-215ENST00000580784 DDX3XO00571 662 aaKnown RBP eCLIP21.6■■□□□ 1.05
CSNK1D-215ENST00000580784 TSPAN6O43657 245 aa21.6■■□□□ 1.05
CSNK1D-215ENST00000580784 SKILP12757 684 aa21.6■■□□□ 1.05
CSNK1D-215ENST00000580784 PRKCIP41743 596 aa21.6■■□□□ 1.05
CSNK1D-215ENST00000580784 CLDN6P56747 220 aa21.6■■□□□ 1.05
CSNK1D-215ENST00000580784 TPI1P60174 286 aa21.6■■□□□ 1.05
CSNK1D-215ENST00000580784 CA9Q16790 459 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms