RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 RABEPKQ7Z6M1 372 aa10.4□□□□□ -0.74
SS18-210ENST00000578700 TADA2BQ86TJ2 420 aa10.4□□□□□ -0.74
SS18-210ENST00000578700 TMEM25Q86YD3 366 aa10.4□□□□□ -0.74
SS18-210ENST00000578700 MIB1Q86YT6 1006 aa10.4□□□□□ -0.74
SS18-210ENST00000578700 CCDC185Q8N715 623 aa10.4□□□□□ -0.74
SS18-210ENST00000578700 SLC35B2Q8TB61 432 aa10.4□□□□□ -0.74
SS18-210ENST00000578700 FAM71BQ8TC56 605 aa10.4□□□□□ -0.74
SS18-210ENST00000578700 SETD7Q8WTS6 366 aaKnown RBP10.4□□□□□ -0.74
SS18-210ENST00000578700 FBXO32Q969P5 355 aa10.4□□□□□ -0.74
SS18-210ENST00000578700 LRIG1Q96JA1 1093 aa10.4□□□□□ -0.74
SS18-210ENST00000578700 SERPINB11Q96P15 392 aa10.4□□□□□ -0.74
SS18-210ENST00000578700 CDK5RAP1Q96SZ6 601 aaKnown RBP10.4□□□□□ -0.74
SS18-210ENST00000578700 ACOX2Q99424 681 aa10.4□□□□□ -0.74
SS18-210ENST00000578700 EPAS1Q99814 870 aa10.4□□□□□ -0.74
SS18-210ENST00000578700 FAM118BQ9BPY3 351 aa10.4□□□□□ -0.74
SS18-210ENST00000578700 TTLL2Q9BWV7 592 aa10.4□□□□□ -0.74
SS18-210ENST00000578700 NACA2Q9H009 215 aa10.4□□□□□ -0.74
SS18-210ENST00000578700 MIR1-1HGQ9H1L0 117 aa10.4□□□□□ -0.74
SS18-210ENST00000578700 PCDH9Q9HC56 1237 aa10.4□□□□□ -0.74
SS18-210ENST00000578700 CD93Q9NPY3 652 aa10.4□□□□□ -0.74
SS18-210ENST00000578700 DNAAF2Q9NVR5 837 aaKnown RBP10.4□□□□□ -0.74
SS18-210ENST00000578700 SLC12A6Q9UHW9 1150 aa10.4□□□□□ -0.74
SS18-210ENST00000578700 HPCAL4Q9UM19 191 aa10.4□□□□□ -0.74
SS18-210ENST00000578700 SCML2Q9UQR0 700 aa10.4□□□□□ -0.74
SS18-210ENST00000578700 HEY1Q9Y5J3 304 aa10.4□□□□□ -0.74
SS18-210ENST00000578700 PLXNB3Q9ULL4 1909 aa10.4□□□□□ -0.74
SS18-210ENST00000578700 PTPRBP23467 1997 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 E2F8A0AVK6 867 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 COCHO43405 550 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 CREB3O43889 395 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 ZNF217O75362 1048 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 OLFM2O95897 454 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 CAPNS1P04632 268 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 FAM153BP0C7A2 387 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 CHRM1P11229 460 aaPredicted RBP10.39□□□□□ -0.75
SS18-210ENST00000578700 GNSP15586 552 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 NDUFV2P19404 249 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 TFE3P19532 575 aaPredicted RBP10.39□□□□□ -0.75
SS18-210ENST00000578700 CCR1P32246 355 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 HTR7P34969 479 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 HCAR3P49019 387 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 CXCR3P49682 368 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 VPS41P49754 854 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 TPI1P60174 286 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 ADCY2Q08462 1091 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 IFFO1Q0D2I5 559 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 GPS1Q13098 491 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 MMRN1Q13201 1228 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 XRCC4Q13426 336 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 NOMO1Q15155 1222 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 TRADDQ15628 312 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 P3H1Q32P28 736 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 FAM153CQ494X1 144 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 RAB6CQ53S08 254 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 HECTD3Q5T447 861 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 IZUMO3Q5VZ72 239 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 GRAMD4Q6IC98 578 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 TPGS1Q6ZTW0 290 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 ANKS1BQ7Z6G8 1248 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 CROCCP2Q86T23 111 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 NAXDQ8IW45 347 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 BBS7Q8IWZ6 715 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 PHTF2Q8N3S3 785 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 PLD5Q8N7P1 536 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 KIAA1958Q8N8K9 716 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 TERB1Q8NA31 727 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 PDZD8Q8NEN9 1154 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 PCDH19Q8TAB3 1148 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 SCAMP5Q8TAC9 235 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 ADAM32Q8TC27 787 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 DQX1Q8TE96 717 aaKnown RBP10.39□□□□□ -0.75
SS18-210ENST00000578700 UBLCP1Q8WVY7 318 aaPredicted RBP10.39□□□□□ -0.75
SS18-210ENST00000578700 ADAMTS14Q8WXS8 1223 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 ART4Q93070 314 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 WBP2Q969T9 261 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 FAF2Q96CS3 445 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 CSPG4P5Q96PW8 444 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 KCTD15Q96SI1 283 aaPredicted RBP10.39□□□□□ -0.75
SS18-210ENST00000578700 TMEM121Q9BTD3 319 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 RAB6CQ9H0N0 254 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 TLR8Q9NR97 1041 aaKnown RBP10.39□□□□□ -0.75
SS18-210ENST00000578700 SPHK2Q9NRA0 654 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 PIGVQ9NUD9 493 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 TMEM30AQ9NV96 361 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 DNAJC17Q9NVM6 304 aaKnown RBP10.39□□□□□ -0.75
SS18-210ENST00000578700 CLIC5Q9NZA1 410 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 GRHL1Q9NZI5 618 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 FAM153AQ9UHL3 310 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 TPX2Q9ULW0 747 aaKnown RBP10.39□□□□□ -0.75
SS18-210ENST00000578700 APOBEC2Q9Y235 224 aaKnown RBP10.39□□□□□ -0.75
SS18-210ENST00000578700 RAXQ9Y2V3 346 aa10.39□□□□□ -0.75
SS18-210ENST00000578700 A0A1W2PQF6 199 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 A0A1W2PQH9 124 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 HACD1B0YJ81 288 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 WASH3PC4AMC7 463 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 NEDD8-MDP1E9PL57 170 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 PPP1R12AO14974 1030 aaPredicted RBP10.38□□□□□ -0.75
SS18-210ENST00000578700 SASH3O75995 380 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 FYNP06241 537 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 SERPINB6P35237 376 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms