RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 TBC1D3FA6NER0 549 aaPredicted RBP13.01□□□□□ -0.33
CCDC57-211ENST00000578187 TBC1D3LB9A6J9 549 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 C1QTNF3-AMACRE9PGA6 284 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 H3BRJ5 948 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 VILLO15195 856 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 ALOX15BO15296 676 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 YKT6O15498 198 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 PCDHGA12O60330 932 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 CD160O95971 181 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 IGHV4-34P06331 123 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 TBC1D3HP0C7X1 549 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 MAGEA1P43355 309 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 CCR5P51681 352 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 HADHBP55084 474 aaKnown RBP13.01□□□□□ -0.33
CCDC57-211ENST00000578187 SLC20A2Q08357 652 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 CCDC15Q0P6D6 951 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 POLD3Q15054 466 aaPredicted RBP13.01□□□□□ -0.33
CCDC57-211ENST00000578187 DLG2Q15700 870 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 PARP15Q460N3 678 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 AFMIDQ63HM1 303 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 TBC1D3GQ6DHY5 549 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 TBC1D3CQ6IPX1 549 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 C22orf39Q6P5X5 142 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 DBX2Q6ZNG2 339 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 Q6ZVU0 165 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 TMEM139Q8IV31 216 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 TBC1D3Q8IZP1 549 aaPredicted RBP13.01□□□□□ -0.33
CCDC57-211ENST00000578187 STK40Q8N2I9 435 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 GALNT15Q8N3T1 639 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 ATP11CQ8NB49 1132 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 FAM71BQ8TC56 605 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 TSC1Q92574 1164 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 HSPH1Q92598 858 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 HMCESQ96FZ2 354 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 FAM129BQ96TA1 746 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 CEP44Q9C0F1 390 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 KLC2Q9H0B6 622 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 KDM4CQ9H3R0 1056 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 ZWILCHQ9H900 591 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 CWC15Q9P013 229 aaKnown RBP13.01□□□□□ -0.33
CCDC57-211ENST00000578187 FTSJ1Q9UET6 329 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 SHROOM3Q8TF72 1996 aa13.01□□□□□ -0.33
CCDC57-211ENST00000578187 TPRP12270 2363 aaKnown RBP13.01□□□□□ -0.33
CCDC57-211ENST00000578187 MAP1BP46821 2468 aaKnown RBP13.01□□□□□ -0.33
CCDC57-211ENST00000578187 CHD8Q9HCK8 2581 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 ANKRD36A6QL64 1941 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 ZSCAN5CA6NGD5 496 aaPredicted RBP13□□□□□ -0.33
CCDC57-211ENST00000578187 GOLGA8CPA6NN73 597 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 SRRM3A6NNA2 597 aaPredicted RBP13□□□□□ -0.33
CCDC57-211ENST00000578187 RASA4BC9J798 803 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 K7ERQ8 282 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 MCF2LO15068 1137 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 SLC7A4O43246 635 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 RASA4O43374 803 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 SMAD6O43541 496 aaKnown RBP13□□□□□ -0.33
CCDC57-211ENST00000578187 TNFSF14O43557 240 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 KDELR3O43731 214 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 MAGEC1O60732 1142 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 ZNF821O75541 412 aaPredicted RBP13□□□□□ -0.33
CCDC57-211ENST00000578187 NDUFA10O95299 355 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 ERCC2P18074 760 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 CD38P28907 300 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 NUDT1P36639 197 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 ARL4AP40617 200 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 ARHGAP25P42331 645 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 CTSKP43235 329 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 ARRB1P49407 418 aaPredicted RBP13□□□□□ -0.33
CCDC57-211ENST00000578187 ARSEP51690 589 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 NDST2P52849 883 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 ADPRHP54922 357 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 GEMIN4P57678 1058 aaKnown RBP13□□□□□ -0.33
CCDC57-211ENST00000578187 TAS2R40P59535 323 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 SERINC3Q13530 473 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 SPA17Q15506 151 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 HADHQ16836 314 aaKnown RBP13□□□□□ -0.33
CCDC57-211ENST00000578187 RAD9BQ6WBX8 426 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 POLNQ7Z5Q5 900 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 PRPF39Q86UA1 669 aaKnown RBP13□□□□□ -0.33
CCDC57-211ENST00000578187 OXR1Q8N573 874 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 PCDH20Q8N6Y1 951 aaKnown RBP13□□□□□ -0.33
CCDC57-211ENST00000578187 SPC24Q8NBT2 197 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 BAHD1Q8TBE0 780 aaPredicted RBP13□□□□□ -0.33
CCDC57-211ENST00000578187 SERAC1Q96JX3 654 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 SLC6A18Q96N87 628 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 CSPG4P5Q96PW8 444 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 PCDH18Q9HCL0 1135 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 LUC7LQ9NQ29 371 aaKnown RBP13□□□□□ -0.33
CCDC57-211ENST00000578187 GDF3Q9NR23 364 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 RCOR3Q9P2K3 495 aaPredicted RBP13□□□□□ -0.33
CCDC57-211ENST00000578187 SERGEFQ9UGK8 458 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 PCDHA13Q9Y5I0 950 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 EPN1Q9Y6I3 576 aaPredicted RBP13□□□□□ -0.33
CCDC57-211ENST00000578187 WDFY3Q8IZQ1 3526 aa13□□□□□ -0.33
CCDC57-211ENST00000578187 FRYQ5TBA9 3013 aa12.99□□□□□ -0.33
CCDC57-211ENST00000578187 A0A0A6YYK5 440 aaPredicted RBP12.99□□□□□ -0.33
CCDC57-211ENST00000578187 H0Y8X5 98 aa12.99□□□□□ -0.33
CCDC57-211ENST00000578187 ITGAVP06756 1048 aa12.99□□□□□ -0.33
CCDC57-211ENST00000578187 MESDQ14696 234 aa12.99□□□□□ -0.33
CCDC57-211ENST00000578187 LAYNQ6UX15 382 aa12.99□□□□□ -0.33
CCDC57-211ENST00000578187 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms