RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 DNAJC3Q13217 504 aa14.01□□□□□ -0.17
RNF43-202ENST00000577625 CTC1Q2NKJ3 1217 aa14.01□□□□□ -0.17
RNF43-202ENST00000577625 MS4A13Q5J8X5 152 aa14.01□□□□□ -0.17
RNF43-202ENST00000577625 ZSCAN18Q8TBC5 510 aaPredicted RBP14.01□□□□□ -0.17
RNF43-202ENST00000577625 ZNF398Q8TD17 642 aa14.01□□□□□ -0.17
RNF43-202ENST00000577625 DCAKDQ8WVC6 231 aa14.01□□□□□ -0.17
RNF43-202ENST00000577625 GFM2Q969S9 779 aaKnown RBP14.01□□□□□ -0.17
RNF43-202ENST00000577625 MCUR1Q96AQ8 359 aa14.01□□□□□ -0.17
RNF43-202ENST00000577625 DGCR14Q96DF8 476 aaKnown RBP14.01□□□□□ -0.17
RNF43-202ENST00000577625 MRRFQ96E11 262 aaKnown RBP14.01□□□□□ -0.17
RNF43-202ENST00000577625 AGAP3Q96P47 875 aa14.01□□□□□ -0.17
RNF43-202ENST00000577625 PLAC1Q9HBJ0 212 aa14.01□□□□□ -0.17
RNF43-202ENST00000577625 IL23AQ9NPF7 189 aa14.01□□□□□ -0.17
RNF43-202ENST00000577625 TIMMDC1Q9NPL8 285 aa14.01□□□□□ -0.17
RNF43-202ENST00000577625 TBCCD1Q9NVR7 557 aa14.01□□□□□ -0.17
RNF43-202ENST00000577625 MPP6Q9NZW5 540 aa14.01□□□□□ -0.17
RNF43-202ENST00000577625 TTLL3Q9Y4R7 772 aa14.01□□□□□ -0.17
RNF43-202ENST00000577625 CHD5Q8TDI0 1954 aa14.01□□□□□ -0.17
RNF43-202ENST00000577625 DENND4CQ5VZ89 1909 aa14□□□□□ -0.17
RNF43-202ENST00000577625 BIRC5O15392 142 aa14□□□□□ -0.17
RNF43-202ENST00000577625 GYG2O15488 501 aa14□□□□□ -0.17
RNF43-202ENST00000577625 TEX44Q53QW1 395 aa14□□□□□ -0.17
RNF43-202ENST00000577625 TPGS2Q68CL5 300 aa14□□□□□ -0.17
RNF43-202ENST00000577625 ARHGAP36Q6ZRI8 547 aa14□□□□□ -0.17
RNF43-202ENST00000577625 C16orf59Q7L2K0 433 aa14□□□□□ -0.17
RNF43-202ENST00000577625 CLNKQ7Z7G1 428 aa14□□□□□ -0.17
RNF43-202ENST00000577625 DDX53Q86TM3 631 aaKnown RBP14□□□□□ -0.17
RNF43-202ENST00000577625 SCUBE1Q8IWY4 988 aa14□□□□□ -0.17
RNF43-202ENST00000577625 RTL3Q8N8U3 475 aaKnown RBP14□□□□□ -0.17
RNF43-202ENST00000577625 SLC44A1Q8WWI5 657 aa14□□□□□ -0.17
RNF43-202ENST00000577625 TSGA13Q96PP4 275 aa14□□□□□ -0.17
RNF43-202ENST00000577625 YME1L1Q96TA2 773 aa14□□□□□ -0.17
RNF43-202ENST00000577625 TMEM106CQ9BVX2 250 aa14□□□□□ -0.17
RNF43-202ENST00000577625 TRABDQ9H4I3 376 aa14□□□□□ -0.17
RNF43-202ENST00000577625 SLC12A8A0AV02 714 aa14□□□□□ -0.17
RNF43-202ENST00000577625 WASH4PA8MWX3 477 aa14□□□□□ -0.17
RNF43-202ENST00000577625 PRPF4O43172 522 aaKnown RBP eCLIP14□□□□□ -0.17
RNF43-202ENST00000577625 URODP06132 367 aa14□□□□□ -0.17
RNF43-202ENST00000577625 HMGA1P17096 107 aaKnown RBP14□□□□□ -0.17
RNF43-202ENST00000577625 PRKCHP24723 683 aa14□□□□□ -0.17
RNF43-202ENST00000577625 SLC18A1P54219 525 aa14□□□□□ -0.17
RNF43-202ENST00000577625 WDR4P57081 412 aaKnown RBP14□□□□□ -0.17
RNF43-202ENST00000577625 RING1Q06587 406 aa14□□□□□ -0.17
RNF43-202ENST00000577625 GRM2Q14416 872 aa14□□□□□ -0.17
RNF43-202ENST00000577625 AFMIDQ63HM1 303 aa14□□□□□ -0.17
RNF43-202ENST00000577625 B3GNT6Q6ZMB0 384 aa14□□□□□ -0.17
RNF43-202ENST00000577625 UNC5AQ6ZN44 842 aa14□□□□□ -0.17
RNF43-202ENST00000577625 NLRP9Q7RTR0 991 aa14□□□□□ -0.17
RNF43-202ENST00000577625 MPP5Q8N3R9 675 aa14□□□□□ -0.17
RNF43-202ENST00000577625 ATP6V0D2Q8N8Y2 350 aa14□□□□□ -0.17
RNF43-202ENST00000577625 MZB1Q8WU39 189 aa14□□□□□ -0.17
RNF43-202ENST00000577625 AUTS2Q8WXX7 1259 aa14□□□□□ -0.17
RNF43-202ENST00000577625 NMD3Q96D46 503 aaKnown RBP14□□□□□ -0.17
RNF43-202ENST00000577625 BTN2A3PQ96KV6 586 aa14□□□□□ -0.17
RNF43-202ENST00000577625 GBA3Q9H227 469 aa14□□□□□ -0.17
RNF43-202ENST00000577625 VANGL2Q9ULK5 521 aa14□□□□□ -0.17
RNF43-202ENST00000577625 YIPF1Q9Y548 306 aa14□□□□□ -0.17
RNF43-202ENST00000577625 IGLV3-10A0A075B6K4 115 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 F8W8V4 182 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 DFFAO00273 331 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 ZBTB24O43167 697 aaPredicted RBP13.99□□□□□ -0.17
RNF43-202ENST00000577625 TPD52L2O43399 206 aaKnown RBP13.99□□□□□ -0.17
RNF43-202ENST00000577625 RNASEH1O60930 286 aaKnown RBP13.99□□□□□ -0.17
RNF43-202ENST00000577625 PIAS1O75925 651 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 HMBSP08397 361 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 CCNCP24863 283 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 VARSP26640 1264 aaKnown RBP13.99□□□□□ -0.17
RNF43-202ENST00000577625 CD68P34810 354 aaPredicted RBP13.99□□□□□ -0.17
RNF43-202ENST00000577625 RAB33AQ14088 237 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 HNRNPDQ14103 355 aaKnown RBP13.99□□□□□ -0.17
RNF43-202ENST00000577625 ITPRIPL1Q6GPH6 555 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 ARHGAP24Q8N264 748 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 ZNF276Q8N554 614 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 GSDMBQ8TAX9 411 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 OVCA2Q8WZ82 227 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 TEKT5Q96M29 485 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 SLC39A8Q9C0K1 460 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 CYP4F11Q9HBI6 524 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 SSU72Q9NP77 194 aaKnown RBP13.99□□□□□ -0.17
RNF43-202ENST00000577625 FNIP2Q9P278 1114 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 SMG5Q9UPR3 1016 aaKnown RBP13.99□□□□□ -0.17
RNF43-202ENST00000577625 MAD1L1Q9Y6D9 718 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 WASF2Q9Y6W5 498 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 CARNS1A5YM72 827 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 SDR42E2A6NKP2 422 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 ERI2A8K979 691 aaKnown RBP13.99□□□□□ -0.17
RNF43-202ENST00000577625 DNAJB2P25686 324 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 CYS1Q717R9 158 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 PRPF39Q86UA1 669 aaKnown RBP13.99□□□□□ -0.17
RNF43-202ENST00000577625 ALDH16A1Q8IZ83 802 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 ATPAF2Q8N5M1 289 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 PDZD8Q8NEN9 1154 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 PTCD3Q96EY7 689 aaKnown RBP13.99□□□□□ -0.17
RNF43-202ENST00000577625 NOL6Q9H6R4 1146 aaKnown RBP13.99□□□□□ -0.17
RNF43-202ENST00000577625 PCDHA11Q9Y5I1 949 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 IKBKGQ9Y6K9 419 aa13.99□□□□□ -0.17
RNF43-202ENST00000577625 MIA3Q5JRA6 1907 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 IQANK1A0A1B0GTG1 560 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 A0A1W2PPM1 405 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 MAFKO60675 156 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms