RNA–Protein interactions for RNA: ENST00000577101.5

NDE1-212, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-212ENST00000577101 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 MIF4GDA9UHW6 222 aaKnown RBP9.92□□□□□ -0.82
NDE1-212ENST00000577101 KCNK1O00180 336 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 TRAFD1O14545 582 aaPredicted RBP9.92□□□□□ -0.82
NDE1-212ENST00000577101 ENC1O14682 589 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 MATN3O15232 486 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 ALDH1A2O94788 518 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 IL1BP01584 269 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 ATP1A1P05023 1023 aaKnown RBP9.92□□□□□ -0.82
NDE1-212ENST00000577101 MMP2P08253 660 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 TGM2P21980 687 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 CD68P34810 354 aaPredicted RBP9.92□□□□□ -0.82
NDE1-212ENST00000577101 NNMTP40261 264 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 PTGER3P43115 390 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 COPS2P61201 443 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 RHOAP61586 193 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 OTUD4Q01804 1114 aaKnown RBP9.92□□□□□ -0.82
NDE1-212ENST00000577101 WASHC5Q12768 1159 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 CNTN1Q12860 1018 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 PTPRRQ15256 657 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 E2F5Q15329 346 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 KCTD19Q17RG1 926 aaPredicted RBP9.92□□□□□ -0.82
NDE1-212ENST00000577101 MYLK3Q32MK0 819 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 TMCO4Q5TGY1 634 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 ALG1LQ6GMV1 187 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 NCEH1Q6PIU2 408 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 PARS2Q7L3T8 475 aaKnown RBP9.92□□□□□ -0.82
NDE1-212ENST00000577101 FAM124AQ86V42 546 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 CCDC50Q8IVM0 306 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 TMEFF1Q8IYR6 380 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 TXLNBQ8N3L3 684 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 TMIEQ8NEW7 156 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 ARRDC2Q8TBH0 407 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 ACTL9Q8TC94 416 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 CASKIN2Q8WXE0 1202 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 TOE1Q96GM8 510 aaKnown RBP9.92□□□□□ -0.82
NDE1-212ENST00000577101 ZNF599Q96NL3 588 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 SMIM14Q96QK8 99 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 GORASP1Q9BQQ3 440 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 HEPHQ9BQS7 1158 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 C6orf106Q9H6K1 298 aaPredicted RBP9.92□□□□□ -0.82
NDE1-212ENST00000577101 ZDHHC6Q9H6R6 413 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 FBRSQ9HAH7 460 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 GGT7Q9UJ14 662 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 EFR3BQ9Y2G0 817 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 ATP8A1Q9Y2Q0 1164 aa9.92□□□□□ -0.82
NDE1-212ENST00000577101 TSPAN11A1L157 253 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 APOC4-APOC2K7ER74 178 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 APOC2P02655 101 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 DNTTP04053 509 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 UGT2B4P06133 528 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 IGHV4-34P06331 123 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 C5AR1P21730 350 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 TGM1P22735 817 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 PTPN3P26045 913 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 CD6P30203 668 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 CXCR5P32302 372 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 CNR2P34972 360 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 CSNK1DP48730 415 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 ADPRHP54922 357 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 GEMIN4P57678 1058 aaKnown RBP9.91□□□□□ -0.82
NDE1-212ENST00000577101 SNRPD1P62314 119 aaKnown RBP9.91□□□□□ -0.82
NDE1-212ENST00000577101 PPP2CBP62714 309 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 PPP2CAP67775 309 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 IFI35P80217 286 aaPredicted RBP9.91□□□□□ -0.82
NDE1-212ENST00000577101 DSC2Q02487 901 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 ZBTB16Q05516 673 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 TRAF2Q12933 501 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 HNRNPDQ14103 355 aaKnown RBP9.91□□□□□ -0.82
NDE1-212ENST00000577101 SIM2Q14190 667 aaPredicted RBP9.91□□□□□ -0.82
NDE1-212ENST00000577101 RFTN1Q14699 578 aaPredicted RBP9.91□□□□□ -0.82
NDE1-212ENST00000577101 LRRC73Q5JTD7 316 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 USP30Q70CQ3 517 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 SRLQ86TD4 932 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 ZC3H18Q86VM9 953 aaKnown RBP9.91□□□□□ -0.82
NDE1-212ENST00000577101 CAMK1DQ8IU85 385 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 CCDC13Q8IYE1 715 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 HDDC3Q8N4P3 179 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.91□□□□□ -0.82
NDE1-212ENST00000577101 ANP32BQ92688 251 aaKnown RBP9.91□□□□□ -0.82
NDE1-212ENST00000577101 TADA1Q96BN2 335 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 ECHDC3Q96DC8 303 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 KLHL32Q96NJ5 620 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 WDR24Q96S15 920 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 GPR174Q9BXC1 333 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 MAK16Q9BXY0 300 aaKnown RBP9.91□□□□□ -0.82
NDE1-212ENST00000577101 CPEB1Q9BZB8 566 aaKnown RBP9.91□□□□□ -0.82
NDE1-212ENST00000577101 NOD2Q9HC29 1040 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 NT5MQ9NPB1 228 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 KCND1Q9NSA2 647 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 TMEM74BQ9NUR3 256 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 FBXL12Q9NXK8 326 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 DONSONQ9NYP3 566 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 ITM2BQ9Y287 266 aa9.91□□□□□ -0.82
NDE1-212ENST00000577101 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.91□□□□□ -0.82
NDE1-212ENST00000577101 ATXN2Q99700 1313 aaKnown RBP9.9□□□□□ -0.82
NDE1-212ENST00000577101 MUC6Q6W4X9 2439 aa9.9□□□□□ -0.82
NDE1-212ENST00000577101 PRR23AA6NEV1 266 aa9.9□□□□□ -0.82
NDE1-212ENST00000577101 KPNA3O00505 521 aaPredicted RBP9.9□□□□□ -0.82
NDE1-212ENST00000577101 KRIT1O00522 736 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms