RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 DTLQ9NZJ0 730 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 CACNG4Q9UBN1 327 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 DHRS12A0PJE2 317 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 DDNO94850 711 aaPredicted RBP18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 CDH2P19022 906 aaPredicted RBP18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 THPOP40225 353 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 PPP3CCP48454 512 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 RGS4P49798 205 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 MMP14P50281 582 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 PCID2Q5JVF3 399 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 CELF3Q5SZQ8 465 aaKnown RBP18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 ZDHHC13Q8IUH4 622 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 CDYL2Q8N8U2 506 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 TNIP2Q8NFZ5 429 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 FNIP1Q8TF40 1166 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 HDAC10Q969S8 669 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 FAM120BQ96EK7 910 aaKnown RBP18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 C9orf16Q9BUW7 83 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 CINPQ9BW66 212 aaPredicted RBP18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 C6orf62Q9GZU0 229 aaPredicted RBP18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 NMRK2Q9NPI5 230 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 MOSPD1Q9UJG1 213 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 FAM32AQ9Y421 112 aaKnown RBP18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 MYO9BQ13459 2157 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 DNAJA2O60884 412 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 WDR47O94967 919 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 KRT75O95678 551 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 LCLAT1Q6UWP7 414 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 CRLS1Q9UJA2 301 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 SLC13A4Q9UKG4 626 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 RAD54BQ9Y620 910 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 TMEM233B4DJY2 109 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 FFAR3O14843 346 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 GPR42O15529 346 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 RTN3O95197 1032 aaPredicted RBP18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 CXCR3P49682 368 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 NAA20P61599 178 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 POLD3Q15054 466 aaPredicted RBP18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 VPS26BQ4G0F5 336 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 ZNF618Q5T7W0 954 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 LPCAT1Q8NF37 534 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 ITFG1Q8TB96 612 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 FBXO32Q969P5 355 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 RIBC2Q9H4K1 309 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 IMPAD1Q9NX62 359 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 CPA4Q9UI42 421 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 TIMM22Q9Y584 194 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 PSAT1Q9Y617 370 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 FER1L4A9Z1Z3 1794 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 CCR10P46092 362 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 KLF1Q13351 362 aaPredicted RBP18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 SNAPC2Q13487 334 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 CBR4Q8N4T8 237 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 ESAMQ96AP7 390 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 ARHGEF4Q9NR80 690 aa18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 RBMX2Q9Y388 322 aaKnown RBP18.07■□□□□ 0.48
ATPAF1-214ENST00000576409 C2orf81A6NN90 581 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 HCRTO43612 131 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 B4GALT4O60513 344 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 ATP5BP06576 529 aaKnown RBP18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 LTA4HP09960 611 aaKnown RBP18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 OR1E1P30953 314 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 ARL2P36404 184 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 FAM98BQ52LJ0 330 aaKnown RBP18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 RAB6CQ53S08 254 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 HGH1Q9BTY7 390 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 RAB6CQ9H0N0 254 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 ZFP14Q9HCL3 533 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 SFMBT1Q9UHJ3 866 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 ANAPC2Q9UJX6 822 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 RGL2O15211 777 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 NRP2O60462 931 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 MYO1DO94832 1006 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 GPD2P43304 727 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 RENBPP51606 427 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 WNT7BP56706 349 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 SLC9A4Q6AI14 798 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 GLB1LQ6UWU2 654 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 CMASQ8NFW8 434 aaPredicted RBP18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 UTP15Q8TED0 518 aaKnown RBP18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 MRPS26Q9BYN8 205 aaKnown RBP18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 COQ10BQ9H8M1 238 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 NMBRP28336 390 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 CCT8P50990 548 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 BEX3Q00994 111 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 SP2Q02086 613 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 VGLL4Q14135 290 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 IL27RAQ6UWB1 636 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 LPPQ93052 612 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 PIWIL1Q96J94 861 aaKnown RBP18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 ACTR8Q9H981 624 aa18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 PRPF19Q9UMS4 504 aaKnown RBP18.06■□□□□ 0.48
ATPAF1-214ENST00000576409 FBXO21O94952 628 aa18.05■□□□□ 0.48
ATPAF1-214ENST00000576409 SERPIND1P05546 499 aa18.05■□□□□ 0.48
ATPAF1-214ENST00000576409 LMO2P25791 158 aa18.05■□□□□ 0.48
ATPAF1-214ENST00000576409 ADRA1BP35368 520 aa18.05■□□□□ 0.48
ATPAF1-214ENST00000576409 NR1D2Q14995 579 aa18.05■□□□□ 0.48
ATPAF1-214ENST00000576409 NADK2Q4G0N4 442 aa18.05■□□□□ 0.48
ATPAF1-214ENST00000576409 ESRP1Q6NXG1 681 aaKnown RBP18.05■□□□□ 0.48
ATPAF1-214ENST00000576409 RPS27LQ71UM5 84 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms