RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 SNRPAP09012 282 aaKnown RBP13.05□□□□□ -0.32
PRPF8-207ENST00000573681 SERPINH1P50454 418 aaKnown RBP13.05□□□□□ -0.32
PRPF8-207ENST00000573681 MAXP61244 160 aa13.05□□□□□ -0.32
PRPF8-207ENST00000573681 GNGT1P63211 74 aa13.05□□□□□ -0.32
PRPF8-207ENST00000573681 CRADDP78560 199 aa13.05□□□□□ -0.32
PRPF8-207ENST00000573681 CDK18Q07002 472 aa13.05□□□□□ -0.32
PRPF8-207ENST00000573681 FSCBQ5H9T9 825 aa13.05□□□□□ -0.32
PRPF8-207ENST00000573681 ZNF697Q5TEC3 545 aa13.05□□□□□ -0.32
PRPF8-207ENST00000573681 MARK2Q7KZI7 788 aaKnown RBP13.05□□□□□ -0.32
PRPF8-207ENST00000573681 NLRP9Q7RTR0 991 aa13.05□□□□□ -0.32
PRPF8-207ENST00000573681 ADGRD2Q7Z7M1 963 aa13.05□□□□□ -0.32
PRPF8-207ENST00000573681 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.05□□□□□ -0.32
PRPF8-207ENST00000573681 DCAF4L2Q8NA75 395 aa13.05□□□□□ -0.32
PRPF8-207ENST00000573681 IFT43Q96FT9 208 aa13.05□□□□□ -0.32
PRPF8-207ENST00000573681 C2orf49Q9BVC5 232 aaPredicted RBP13.05□□□□□ -0.32
PRPF8-207ENST00000573681 SFXN1Q9H9B4 322 aa13.05□□□□□ -0.32
PRPF8-207ENST00000573681 CERS4Q9HA82 394 aa13.05□□□□□ -0.32
PRPF8-207ENST00000573681 KIF9Q9HAQ2 790 aa13.05□□□□□ -0.32
PRPF8-207ENST00000573681 PIH1D1Q9NWS0 290 aaKnown RBP13.05□□□□□ -0.32
PRPF8-207ENST00000573681 VPS28Q9UK41 221 aa13.05□□□□□ -0.32
PRPF8-207ENST00000573681 SMG5Q9UPR3 1016 aaKnown RBP13.05□□□□□ -0.32
PRPF8-207ENST00000573681 PLXNA4Q9HCM2 1894 aa13.04□□□□□ -0.32
PRPF8-207ENST00000573681 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.04□□□□□ -0.32
PRPF8-207ENST00000573681 CXorf49A8MYA2 514 aaPredicted RBP13.04□□□□□ -0.32
PRPF8-207ENST00000573681 INSIG1O15503 277 aa13.04□□□□□ -0.32
PRPF8-207ENST00000573681 PRPF4O43172 522 aaKnown RBP eCLIP13.04□□□□□ -0.329e-6■□□□□ 10.5
PRPF8-207ENST00000573681 ALADP13716 330 aa13.04□□□□□ -0.32
PRPF8-207ENST00000573681 HLA-DPA1P20036 260 aa13.04□□□□□ -0.32
PRPF8-207ENST00000573681 MZF1P28698 734 aaPredicted RBP13.04□□□□□ -0.32
PRPF8-207ENST00000573681 BMP8BP34820 402 aa13.04□□□□□ -0.32
PRPF8-207ENST00000573681 NRIP1P48552 1158 aa13.04□□□□□ -0.32
PRPF8-207ENST00000573681 NTHL1P78549 312 aa13.04□□□□□ -0.32
PRPF8-207ENST00000573681 OLIG2Q13516 323 aa13.04□□□□□ -0.32
PRPF8-207ENST00000573681 KCNC3Q14003 757 aa13.04□□□□□ -0.32
PRPF8-207ENST00000573681 EFTUD2Q15029 972 aaKnown RBP eCLIP13.04□□□□□ -0.322e-7■■■■□ 23.6
PRPF8-207ENST00000573681 SLC5A9Q2M3M2 681 aa13.04□□□□□ -0.32
PRPF8-207ENST00000573681 GRTP1Q5TC63 336 aa13.04□□□□□ -0.32
PRPF8-207ENST00000573681 PDPK2PQ6A1A2 396 aa13.04□□□□□ -0.32
PRPF8-207ENST00000573681 TRMT10BQ6PF06 316 aaKnown RBP13.04□□□□□ -0.32
PRPF8-207ENST00000573681 LEKR1Q6ZMV7 388 aa13.04□□□□□ -0.32
PRPF8-207ENST00000573681 TIFABQ6ZNK6 161 aa13.04□□□□□ -0.32
PRPF8-207ENST00000573681 ARID3BQ8IVW6 561 aaPredicted RBP13.04□□□□□ -0.32
PRPF8-207ENST00000573681 SRRM1Q8IYB3 904 aaKnown RBP13.04□□□□□ -0.32
PRPF8-207ENST00000573681 CELF5Q8N6W0 485 aaKnown RBP13.04□□□□□ -0.32
PRPF8-207ENST00000573681 TTC16Q8NEE8 873 aa13.04□□□□□ -0.32
PRPF8-207ENST00000573681 IRF7Q92985 503 aa13.04□□□□□ -0.32
PRPF8-207ENST00000573681 ZNF669Q96BR6 464 aaPredicted RBP13.04□□□□□ -0.32
PRPF8-207ENST00000573681 CERS2Q96G23 380 aa13.04□□□□□ -0.32
PRPF8-207ENST00000573681 FCRL3Q96P31 734 aaPredicted RBP13.04□□□□□ -0.32
PRPF8-207ENST00000573681 NUDCD1Q96RS6 583 aa13.04□□□□□ -0.32
PRPF8-207ENST00000573681 PPANQ9NQ55 473 aaKnown RBP13.04□□□□□ -0.32
PRPF8-207ENST00000573681 CHRAC1Q9NRG0 131 aa13.04□□□□□ -0.32
PRPF8-207ENST00000573681 SMYD2Q9NRG4 433 aa13.04□□□□□ -0.32
PRPF8-207ENST00000573681 INTS9Q9NV88 658 aaKnown RBP13.04□□□□□ -0.32
PRPF8-207ENST00000573681 NSMCE4AQ9NXX6 385 aa13.04□□□□□ -0.32
PRPF8-207ENST00000573681 NKIRAS1Q9NYS0 192 aa13.04□□□□□ -0.32
PRPF8-207ENST00000573681 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.04□□□□□ -0.32
PRPF8-207ENST00000573681 PRKAG3Q9UGI9 489 aa13.04□□□□□ -0.32
PRPF8-207ENST00000573681 ZCWPW2A0A1B0GU75 182 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 A0A1W2PPM1 405 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 TMEM120BA0PK00 339 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 HEATR9A2RTY3 570 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 NRG2O14511 850 aaPredicted RBP13.03□□□□□ -0.32
PRPF8-207ENST00000573681 SCAMP3O14828 347 aaKnown RBP13.03□□□□□ -0.32
PRPF8-207ENST00000573681 MUSKO15146 869 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 PAPSS2O95340 614 aaPredicted RBP13.03□□□□□ -0.32
PRPF8-207ENST00000573681 CHN1P15882 459 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 PAMP19021 973 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 CR2P20023 1033 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 GLDCP23378 1020 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 CSKP41240 450 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 CSNK1DP48730 415 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 ARF5P84085 180 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 GUCY1A3Q02108 690 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 DMC1Q14565 340 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 SLC1A5Q15758 541 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 ZNF77Q15935 545 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 PCSK7Q16549 785 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 TMEM184AQ6ZMB5 413 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 TPGS1Q6ZTW0 290 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 SLC25A41Q8N5S1 370 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 GABPB2Q8TAK5 448 aaPredicted RBP13.03□□□□□ -0.32
PRPF8-207ENST00000573681 MDM1Q8TC05 714 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 MZB1Q8WU39 189 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 MRPL38Q96DV4 380 aaKnown RBP13.03□□□□□ -0.32
PRPF8-207ENST00000573681 SGSM3Q96HU1 749 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 ZSWIM3Q96MP5 696 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 CPNE1Q99829 537 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 SLC2A11Q9BYW1 496 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 SMG9Q9H0W8 520 aaKnown RBP13.03□□□□□ -0.32
PRPF8-207ENST00000573681 SCUBE2Q9NQ36 999 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 SPHK2Q9NRA0 654 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 TXNDC16Q9P2K2 825 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 CCL26Q9Y258 94 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 TCAF1Q9Y4C2 921 aa13.03□□□□□ -0.32
PRPF8-207ENST00000573681 FAM47DPA6NHR8 397 aa13.02□□□□□ -0.33
PRPF8-207ENST00000573681 NDST3O95803 873 aa13.02□□□□□ -0.33
PRPF8-207ENST00000573681 CD160O95971 181 aa13.02□□□□□ -0.33
PRPF8-207ENST00000573681 PENKP01210 267 aaPredicted RBP13.02□□□□□ -0.33
PRPF8-207ENST00000573681 FGF1P05230 155 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms