RNA–Protein interactions for RNA: ENST00000569341.1

CFDP1-208, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-208ENST00000569341 CCDC137Q6PK04 289 aaKnown RBP4.38□□□□□ -1.71
CFDP1-208ENST00000569341 USP17L6PQ6QN14 398 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 ZDHHC24Q6UX98 284 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 RGS9BPQ6ZS82 235 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 MED25Q71SY5 747 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 KRT77Q7Z794 578 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 DDX42Q86XP3 938 aaKnown RBP eCLIP4.38□□□□□ -1.71
CFDP1-208ENST00000569341 ZNF677Q86XU0 584 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 SLC13A5Q86YT5 568 aaPredicted RBP4.38□□□□□ -1.71
CFDP1-208ENST00000569341 FAM71AQ8IYT1 594 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 MYCT1Q8N699 235 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 TEX9Q8N6V9 391 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 PRELID2Q8N945 189 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 CCDC63Q8NA47 563 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 OLIG1Q8TAK6 271 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 LMO3Q8TAP4 145 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 LNX1Q8TBB1 728 aaPredicted RBP4.38□□□□□ -1.71
CFDP1-208ENST00000569341 SMG7Q92540 1137 aaKnown RBP4.38□□□□□ -1.71
CFDP1-208ENST00000569341 CD101Q93033 1021 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 RAB3IPQ96QF0 476 aaPredicted RBP4.38□□□□□ -1.71
CFDP1-208ENST00000569341 ACCSQ96QU6 501 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 UHRF1Q96T88 793 aaPredicted RBP4.38□□□□□ -1.71
CFDP1-208ENST00000569341 TUBB6Q9BUF5 446 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 FGFBP2Q9BYJ0 223 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 ALOXE3Q9BYJ1 711 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 NEUROG2Q9H2A3 272 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 CPVLQ9H3G5 476 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 C17orf75Q9HAS0 396 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 KIAA1586Q9HCI6 787 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 TOPORSQ9NS56 1045 aaPredicted RBP4.38□□□□□ -1.71
CFDP1-208ENST00000569341 KLHL11Q9NVR0 708 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 GRHL1Q9NZI5 618 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 CTTNBP2NLQ9P2B4 639 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 GABBR1Q9UBS5 961 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 LGALS13Q9UHV8 139 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 EXOC7Q9UPT5 735 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 COQ4Q9Y3A0 265 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 MRPL11Q9Y3B7 192 aaKnown RBP4.38□□□□□ -1.71
CFDP1-208ENST00000569341 MRPL42Q9Y6G3 142 aaKnown RBP4.38□□□□□ -1.71
CFDP1-208ENST00000569341 IKBKGQ9Y6K9 419 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 COL24A1Q17RW2 1714 aa4.38□□□□□ -1.71
CFDP1-208ENST00000569341 SBF2Q86WG5 1849 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 IGLV3-22A0A075B6J6 115 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 CCDC78A2IDD5 438 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 ARHGEF35A5YM69 484 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 FAM86B1E9PN63 330 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 F5H6K3 240 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 FOXN3O00409 490 aaPredicted RBP4.37□□□□□ -1.71
CFDP1-208ENST00000569341 WNT10BO00744 389 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 MAGEB2O15479 319 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 THAP12O43422 761 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 DKC1O60832 514 aaKnown RBP eCLIP4.37□□□□□ -1.71
CFDP1-208ENST00000569341 CAND2O75155 1236 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 CDH16O75309 829 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 SLITRK3O94933 977 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 TTC4O95801 387 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 OAS1P00973 400 aaKnown RBP4.37□□□□□ -1.71
CFDP1-208ENST00000569341 FTLP02792 175 aaPredicted RBP4.37□□□□□ -1.71
CFDP1-208ENST00000569341 VIL1P09327 827 aaKnown RBP4.37□□□□□ -1.71
CFDP1-208ENST00000569341 FAM86B2P0C5J1 330 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 POLR2MP0CAP2 368 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 RAP2AP10114 183 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 EEF2P13639 858 aaKnown RBP4.37□□□□□ -1.71
CFDP1-208ENST00000569341 TMOD1P28289 359 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 ALDH3A1P30838 453 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 STIP1P31948 543 aaKnown RBP4.37□□□□□ -1.71
CFDP1-208ENST00000569341 SLC16A2P36021 539 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 CASP4P49662 377 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 DNA2P51530 1060 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 ZNF132P52740 706 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 PSMC6P62333 389 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 MRPS25P82663 173 aaKnown RBP4.37□□□□□ -1.71
CFDP1-208ENST00000569341 IL9RQ01113 521 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 CDR2Q01850 454 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 GHRHRQ02643 423 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 ICA1Q05084 483 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 RNASELQ05823 741 aaKnown RBP4.37□□□□□ -1.71
CFDP1-208ENST00000569341 STRN3Q13033 797 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 PRPF4BQ13523 1007 aaKnown RBP4.37□□□□□ -1.71
CFDP1-208ENST00000569341 PTK6Q13882 451 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 PPP1R7Q15435 360 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 TRADDQ15628 312 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 PDCD2Q16342 344 aaPredicted RBP4.37□□□□□ -1.71
CFDP1-208ENST00000569341 FSCN1Q16658 493 aaKnown RBP4.37□□□□□ -1.71
CFDP1-208ENST00000569341 SLC4A8Q2Y0W8 1093 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 CCDC38Q502W7 563 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 EPC2Q52LR7 807 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 CEP55Q53EZ4 464 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 ODR4Q5SWX8 454 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 MFSD4BQ5TF39 518 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 DCAF12L1Q5VU92 463 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 APOBEC3HQ6NTF7 200 aaKnown RBP4.37□□□□□ -1.71
CFDP1-208ENST00000569341 CDC42EP5Q6NZY7 148 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 TLDC1Q6P9B6 456 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 B3GNT9Q6UX72 402 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 TRIM72Q6ZMU5 477 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 MIGA2Q7L4E1 593 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 FAM160B2Q86V87 743 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 TDRPQ86YL5 185 aa4.37□□□□□ -1.71
CFDP1-208ENST00000569341 CCDC105Q8IYK2 499 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms