RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 DSG4Q86SJ6 1040 aa16.29■□□□□ 0.2
USB1-215ENST00000569252 PCDH20Q8N6Y1 951 aaKnown RBP16.29■□□□□ 0.2
USB1-215ENST00000569252 IL17RCQ8NAC3 791 aa16.29■□□□□ 0.2
USB1-215ENST00000569252 C1orf54Q8WWF1 131 aa16.29■□□□□ 0.2
USB1-215ENST00000569252 HTR3CQ8WXA8 447 aa16.29■□□□□ 0.2
USB1-215ENST00000569252 EZH1Q92800 747 aaPredicted RBP16.29■□□□□ 0.2
USB1-215ENST00000569252 MRGPRX3Q96LB0 322 aa16.29■□□□□ 0.2
USB1-215ENST00000569252 ZDHHC4Q9NPG8 344 aa16.29■□□□□ 0.2
USB1-215ENST00000569252 MMP17Q9ULZ9 603 aa16.29■□□□□ 0.2
USB1-215ENST00000569252 TTLL3Q9Y4R7 772 aa16.29■□□□□ 0.2
USB1-215ENST00000569252 ATG2BQ96BY7 2078 aa16.29■□□□□ 0.2
USB1-215ENST00000569252 TCRBV7S2A1N4TA0A589 114 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 CFAP69A5D8W1 941 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 WASH3PC4AMC7 463 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 K7ERQ8 282 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 TMCC1O94876 653 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 IGSF6O95976 241 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 JCHAINP01591 159 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 CES1P23141 567 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 STIP1P31948 543 aaKnown RBP16.28■□□□□ 0.2
USB1-215ENST00000569252 PXNP49023 591 aaPredicted RBP16.28■□□□□ 0.2
USB1-215ENST00000569252 DGKEP52429 567 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 SNX1Q13596 522 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 SIM2Q14190 667 aaPredicted RBP16.28■□□□□ 0.2
USB1-215ENST00000569252 CARD16Q5EG05 197 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 SYT13Q7L8C5 426 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 SPEM1Q8N4L4 309 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 PAF1Q8N7H5 531 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 MAGOHBQ96A72 148 aaKnown RBP16.28■□□□□ 0.2
USB1-215ENST00000569252 ACOX2Q99424 681 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 VAT1Q99536 393 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 GABRG3Q99928 467 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 FAM118BQ9BPY3 351 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 HERPUD2Q9BSE4 406 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 RTKNQ9BST9 563 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 AP1M1Q9BXS5 423 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 TMEM245Q9H330 911 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 SMOC1Q9H4F8 434 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 PDFQ9HBH1 243 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 RXFP3Q9NSD7 469 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 AMACRQ9UHK6 382 aa16.28■□□□□ 0.2
USB1-215ENST00000569252 FCF1Q9Y324 198 aaKnown RBP16.28■□□□□ 0.2
USB1-215ENST00000569252 CEP295Q9C0D2 2601 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 BCLAF3A2AJT9 711 aaKnown RBP16.27■□□□□ 0.2
USB1-215ENST00000569252 KCNK1O00180 336 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 KCNN4O15554 427 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 SMAD6O43541 496 aaKnown RBP16.27■□□□□ 0.2
USB1-215ENST00000569252 LIASO43766 372 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 POP4O95707 220 aaKnown RBP16.27■□□□□ 0.2
USB1-215ENST00000569252 ADRB1P08588 477 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 HLA-EP13747 358 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 RBL1P28749 1068 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 CXCL12P48061 93 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 CCR3P51677 355 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 CKAP4Q07065 602 aaKnown RBP16.27■□□□□ 0.2
USB1-215ENST00000569252 NSUN2Q08J23 767 aaKnown RBP eCLIP16.27■□□□□ 0.2
USB1-215ENST00000569252 SLC10A7Q0GE19 358 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 SFSWAPQ12872 951 aaKnown RBP16.27■□□□□ 0.2
USB1-215ENST00000569252 PRKD1Q15139 912 aaPredicted RBP16.27■□□□□ 0.2
USB1-215ENST00000569252 CYTH1Q15438 398 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 ST3GAL2Q16842 350 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 C22orf39Q6P5X5 142 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 PKN3Q6P5Z2 889 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 B4GALNT4Q76KP1 1039 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 CREG2Q8IUH2 290 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 PLPP6Q8IY26 295 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 PGBD3Q8N328 593 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 LRRN4Q8WUT4 740 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 OR8D1Q8WZ84 308 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 GDAP1L1Q96MZ0 367 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 QKIQ96PU8 341 aaKnown RBP eCLIP16.27■□□□□ 0.2
USB1-215ENST00000569252 TNKS2Q9H2K2 1166 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 FBRSQ9HAH7 460 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 NT5MQ9NPB1 228 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 SEMA4GQ9NTN9 838 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 KLHL8Q9P2G9 620 aaPredicted RBP16.27■□□□□ 0.2
USB1-215ENST00000569252 HECAQ9UBI9 543 aaPredicted RBP16.27■□□□□ 0.2
USB1-215ENST00000569252 TRHDEQ9UKU6 1024 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 DNPEPQ9ULA0 475 aa16.27■□□□□ 0.2
USB1-215ENST00000569252 DRG1Q9Y295 367 aaKnown RBP16.27■□□□□ 0.2
USB1-215ENST00000569252 R3HDM2Q9Y2K5 976 aaKnown RBP16.27■□□□□ 0.2
USB1-215ENST00000569252 PRR5-ARHGAP8B1AHC4 643 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 K7ESF4 209 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 SGK1O00141 431 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 ZNF500O60304 480 aaPredicted RBP16.26■□□□□ 0.19
USB1-215ENST00000569252 GSRP00390 522 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 PRKCHP24723 683 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 TNNT3P45378 269 aaPredicted RBP16.26■□□□□ 0.19
USB1-215ENST00000569252 MAPK8P45983 427 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 SCNN1BP51168 640 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 IFI35P80217 286 aaPredicted RBP16.26■□□□□ 0.19
USB1-215ENST00000569252 ARHGAP8P85298 464 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 ENPP2Q13822 863 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 GRM3Q14832 879 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 SF3A2Q15428 464 aaKnown RBP16.26■□□□□ 0.19
USB1-215ENST00000569252 TEX44Q53QW1 395 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 PRR23CQ6ZRP0 262 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 Q6ZVU0 165 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 PID1Q7Z2X4 250 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 TEX26Q8N6G2 289 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms