RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 BCLAF3A2AJT9 711 aaKnown RBP13□□□□□ -0.33
CDT1-203ENST00000569140 KRT86O43790 486 aa13□□□□□ -0.33
CDT1-203ENST00000569140 PIGNO95427 931 aa13□□□□□ -0.33
CDT1-203ENST00000569140 POP4O95707 220 aaKnown RBP13□□□□□ -0.33
CDT1-203ENST00000569140 FTCDO95954 541 aa13□□□□□ -0.33
CDT1-203ENST00000569140 CCDC175P0C221 793 aa13□□□□□ -0.33
CDT1-203ENST00000569140 KRT10P13645 584 aa13□□□□□ -0.33
CDT1-203ENST00000569140 XPAP23025 273 aaPredicted RBP13□□□□□ -0.33
CDT1-203ENST00000569140 DRD3P35462 400 aa13□□□□□ -0.33
CDT1-203ENST00000569140 CCZ1BP86790 482 aa13□□□□□ -0.33
CDT1-203ENST00000569140 CCZ1P86791 482 aaPredicted RBP13□□□□□ -0.33
CDT1-203ENST00000569140 GBE1Q04446 702 aa13□□□□□ -0.33
CDT1-203ENST00000569140 ITKQ08881 620 aa13□□□□□ -0.33
CDT1-203ENST00000569140 CCDC15Q0P6D6 951 aa13□□□□□ -0.33
CDT1-203ENST00000569140 GALNT2Q10471 571 aa13□□□□□ -0.33
CDT1-203ENST00000569140 RFTN1Q14699 578 aaPredicted RBP13□□□□□ -0.33
CDT1-203ENST00000569140 PAFAH1B3Q15102 231 aaKnown RBP13□□□□□ -0.33
CDT1-203ENST00000569140 AASDHQ4L235 1098 aaPredicted RBP13□□□□□ -0.33
CDT1-203ENST00000569140 SPDYCQ5MJ68 293 aa13□□□□□ -0.33
CDT1-203ENST00000569140 CCDC181Q5TID7 509 aa13□□□□□ -0.33
CDT1-203ENST00000569140 KIAA0895LQ68EN5 471 aa13□□□□□ -0.33
CDT1-203ENST00000569140 TIGD7Q6NT04 549 aaPredicted RBP13□□□□□ -0.33
CDT1-203ENST00000569140 FBXL19Q6PCT2 694 aa13□□□□□ -0.33
CDT1-203ENST00000569140 NPNTQ6UXI9 565 aa13□□□□□ -0.33
CDT1-203ENST00000569140 SPOCD1Q6ZMY3 1216 aa13□□□□□ -0.33
CDT1-203ENST00000569140 ERN2Q76MJ5 926 aaKnown RBP13□□□□□ -0.33
CDT1-203ENST00000569140 PEX26Q7Z412 305 aa13□□□□□ -0.33
CDT1-203ENST00000569140 KATNAL2Q8IYT4 538 aa13□□□□□ -0.33
CDT1-203ENST00000569140 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13□□□□□ -0.33
CDT1-203ENST00000569140 TSEN2Q8NCE0 465 aaKnown RBP13□□□□□ -0.33
CDT1-203ENST00000569140 CADM4Q8NFZ8 388 aa13□□□□□ -0.33
CDT1-203ENST00000569140 FAF2Q96CS3 445 aa13□□□□□ -0.33
CDT1-203ENST00000569140 RBM41Q96IZ5 413 aaKnown RBP13□□□□□ -0.33
CDT1-203ENST00000569140 LZTFL1Q9NQ48 299 aa13□□□□□ -0.33
CDT1-203ENST00000569140 SEPT3Q9UH03 358 aa13□□□□□ -0.33
CDT1-203ENST00000569140 AMFRQ9UKV5 643 aa13□□□□□ -0.33
CDT1-203ENST00000569140 WASF2Q9Y6W5 498 aa13□□□□□ -0.33
CDT1-203ENST00000569140 CEP192Q8TEP8 1941 aa13□□□□□ -0.33
CDT1-203ENST00000569140 C3orf70A6NLC5 250 aaPredicted RBP12.99□□□□□ -0.33
CDT1-203ENST00000569140 METTL12A8MUP2 240 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 PATE3B3GLJ2 98 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 RNF103O00237 685 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 INSIG1O15503 277 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 SLC7A4O43246 635 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 MAFKO60675 156 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 ZRANB2O95218 330 aaKnown RBP eCLIP12.99□□□□□ -0.33
CDT1-203ENST00000569140 GNSP15586 552 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 ZFXP17010 805 aaPredicted RBP12.99□□□□□ -0.33
CDT1-203ENST00000569140 MX2P20592 715 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 ITGB7P26010 798 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 MAT2AP31153 395 aaKnown RBP12.99□□□□□ -0.33
CDT1-203ENST00000569140 GARSP41250 739 aaKnown RBP12.99□□□□□ -0.33
CDT1-203ENST00000569140 DPP6P42658 865 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 MMP13P45452 471 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 SCNN1BP51168 640 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 RENBPP51606 427 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 NEK3P51956 506 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 SLC10A7Q0GE19 358 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 TFDP2Q14188 446 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 SF3A2Q15428 464 aaKnown RBP12.99□□□□□ -0.33
CDT1-203ENST00000569140 MARC1Q5VT66 337 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 AGBL4Q5VU57 503 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 TCEAL6Q6IPX3 200 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 GDPD4Q6W3E5 623 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 SYT12Q8IV01 421 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 RCOR2Q8IZ40 523 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 ZCCHC9Q8N567 271 aaKnown RBP12.99□□□□□ -0.33
CDT1-203ENST00000569140 UBL4BQ8N7F7 174 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 OR2T34Q8NGX1 318 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 TCEAL3Q969E4 200 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 HAUS1Q96CS2 278 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 ZNF419Q96HQ0 510 aaPredicted RBP12.99□□□□□ -0.33
CDT1-203ENST00000569140 KLHL32Q96NJ5 620 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 ZNF599Q96NL3 588 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 OSBPL1AQ9BXW6 950 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 PARD6AQ9NPB6 346 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 VPS45Q9NRW7 570 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 SEPT10Q9P0V9 454 aa12.99□□□□□ -0.33
CDT1-203ENST00000569140 EIF2B4Q9UI10 523 aaKnown RBP12.99□□□□□ -0.33
CDT1-203ENST00000569140 PACSIN2Q9UNF0 486 aaPredicted RBP12.99□□□□□ -0.33
CDT1-203ENST00000569140 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.99□□□□□ -0.33
CDT1-203ENST00000569140 NUP205Q92621 2012 aa12.98□□□□□ -0.33
CDT1-203ENST00000569140 TTC24A2A3L6 582 aaPredicted RBP12.98□□□□□ -0.33
CDT1-203ENST00000569140 CCDC66A2RUB6 948 aa12.98□□□□□ -0.33
CDT1-203ENST00000569140 NEMP1O14524 444 aa12.98□□□□□ -0.33
CDT1-203ENST00000569140 KHNYNO15037 678 aaKnown RBP12.98□□□□□ -0.33
CDT1-203ENST00000569140 PLRG1O43660 514 aaKnown RBP12.98□□□□□ -0.33
CDT1-203ENST00000569140 CST8O60676 142 aa12.98□□□□□ -0.33
CDT1-203ENST00000569140 PCDH8O95206 1070 aa12.98□□□□□ -0.33
CDT1-203ENST00000569140 ADRB3P13945 408 aa12.98□□□□□ -0.33
CDT1-203ENST00000569140 CTNNA1P35221 906 aaKnown RBP12.98□□□□□ -0.33
CDT1-203ENST00000569140 CETN2P41208 172 aa12.98□□□□□ -0.33
CDT1-203ENST00000569140 CDKN2BP42772 138 aa12.98□□□□□ -0.33
CDT1-203ENST00000569140 RGRP47804 291 aa12.98□□□□□ -0.33
CDT1-203ENST00000569140 RWDD2BP57060 319 aa12.98□□□□□ -0.33
CDT1-203ENST00000569140 MAXP61244 160 aa12.98□□□□□ -0.33
CDT1-203ENST00000569140 PPP2CBP62714 309 aa12.98□□□□□ -0.33
CDT1-203ENST00000569140 PPP2CAP67775 309 aa12.98□□□□□ -0.33
CDT1-203ENST00000569140 AP1B1Q10567 949 aa12.98□□□□□ -0.33
CDT1-203ENST00000569140 CSRP2Q16527 193 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms