RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 PFN3P60673 137 aa16.04■□□□□ 0.16
HERPUD1-215ENST00000568676 FGL2Q14314 439 aa16.04■□□□□ 0.16
HERPUD1-215ENST00000568676 EXOC3L4Q17RC7 722 aa16.04■□□□□ 0.16
HERPUD1-215ENST00000568676 PTPN20Q4JDL3 420 aa16.04■□□□□ 0.16
HERPUD1-215ENST00000568676 OTUD1Q5VV17 481 aaPredicted RBP16.04■□□□□ 0.16
HERPUD1-215ENST00000568676 GUSBP11Q6P575 273 aa16.04■□□□□ 0.16
HERPUD1-215ENST00000568676 XKR5Q6UX68 686 aa16.04■□□□□ 0.16
HERPUD1-215ENST00000568676 TFAP2DQ7Z6R9 452 aa16.04■□□□□ 0.16
HERPUD1-215ENST00000568676 CLEC14AQ86T13 490 aa16.04■□□□□ 0.16
HERPUD1-215ENST00000568676 KLF6Q99612 283 aaPredicted RBP16.04■□□□□ 0.16
HERPUD1-215ENST00000568676 BOCQ9BWV1 1114 aa16.04■□□□□ 0.16
HERPUD1-215ENST00000568676 ZYG11BQ9C0D3 744 aa16.04■□□□□ 0.16
HERPUD1-215ENST00000568676 ATP13A1Q9HD20 1204 aa16.04■□□□□ 0.16
HERPUD1-215ENST00000568676 COL6A6A6NMZ7 2263 aa16.04■□□□□ 0.16
HERPUD1-215ENST00000568676 MGAQ8IWI9 3026 aa16.03■□□□□ 0.16
HERPUD1-215ENST00000568676 ZMPSTE24O75844 475 aa16.03■□□□□ 0.16
HERPUD1-215ENST00000568676 MYF5P13349 255 aa16.03■□□□□ 0.16
HERPUD1-215ENST00000568676 PRKCSHP14314 528 aaPredicted RBP16.03■□□□□ 0.16
HERPUD1-215ENST00000568676 SLC9A1P19634 815 aa16.03■□□□□ 0.16
HERPUD1-215ENST00000568676 GABRB2P47870 512 aa16.03■□□□□ 0.16
HERPUD1-215ENST00000568676 CCNHP51946 323 aaPredicted RBP16.03■□□□□ 0.16
HERPUD1-215ENST00000568676 THOP1P52888 689 aa16.03■□□□□ 0.16
HERPUD1-215ENST00000568676 STX17P56962 302 aa16.03■□□□□ 0.16
HERPUD1-215ENST00000568676 YPEL5P62699 121 aa16.03■□□□□ 0.16
HERPUD1-215ENST00000568676 EIF3IQ13347 325 aaKnown RBP16.03■□□□□ 0.16
HERPUD1-215ENST00000568676 CCDC81Q6ZN84 652 aa16.03■□□□□ 0.16
HERPUD1-215ENST00000568676 TMEM35BQ8NCS4 154 aa16.03■□□□□ 0.16
HERPUD1-215ENST00000568676 LMX1AQ8TE12 382 aa16.03■□□□□ 0.16
HERPUD1-215ENST00000568676 ATXN7L3BQ96GX2 97 aa16.03■□□□□ 0.16
HERPUD1-215ENST00000568676 CRACR2AQ9BSW2 395 aa16.03■□□□□ 0.16
HERPUD1-215ENST00000568676 SPON2Q9BUD6 331 aa16.03■□□□□ 0.16
HERPUD1-215ENST00000568676 C1QTNF7Q9BXJ2 289 aa16.03■□□□□ 0.16
HERPUD1-215ENST00000568676 OSBPL1AQ9BXW6 950 aa16.03■□□□□ 0.16
HERPUD1-215ENST00000568676 CLMPQ9H6B4 373 aa16.03■□□□□ 0.16
HERPUD1-215ENST00000568676 MPP6Q9NZW5 540 aa16.03■□□□□ 0.16
HERPUD1-215ENST00000568676 PPARGC1AQ9UBK2 798 aaKnown RBP16.03■□□□□ 0.16
HERPUD1-215ENST00000568676 TRPM6Q9BX84 2022 aa16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 ATMQ13315 3056 aa16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 CCDC187A0A096LP49 1063 aa16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 LMO7DNF2Z398 122 aa16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 TMX2-CTNND1H3BSU7 103 aa16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 I6L893 689 aaPredicted RBP16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 RNF103O00237 685 aa16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 NEMP1O14524 444 aa16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 RAD51BO15315 384 aa16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 ITGA2BP08514 1039 aa16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 CDH5P33151 784 aaPredicted RBP16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 DNA2P51530 1060 aa16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 GNA12Q03113 381 aa16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 DEFB133Q30KQ1 61 aa16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 C6orf132Q5T0Z8 1188 aa16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 ESRP1Q6NXG1 681 aaKnown RBP16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 GJB7Q6PEY0 223 aa16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 PARS2Q7L3T8 475 aaKnown RBP16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 ARCQ7LC44 396 aa16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 MSANTD4Q8NCY6 345 aa16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 OR7D4Q8NG98 312 aa16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 C18orf8Q96DM3 657 aa16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 PRR11Q96HE9 360 aaPredicted RBP16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 SLC13A1Q9BZW2 595 aa16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 ANLNQ9NQW6 1124 aa16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 HECAQ9UBI9 543 aaPredicted RBP16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 ZNF212Q9UDV6 495 aa16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 APOBEC3BQ9UH17 382 aaKnown RBP16.02■□□□□ 0.16
HERPUD1-215ENST00000568676 TDRD6O60522 2096 aaKnown RBP16.01■□□□□ 0.15
HERPUD1-215ENST00000568676 IGLON5A6NGN9 336 aa16.01■□□□□ 0.15
HERPUD1-215ENST00000568676 C16orf96A6NNT2 1141 aa16.01■□□□□ 0.15
HERPUD1-215ENST00000568676 SRGAP2O75044 1071 aa16.01■□□□□ 0.15
HERPUD1-215ENST00000568676 ENDOD1O94919 500 aa16.01■□□□□ 0.15
HERPUD1-215ENST00000568676 ANXA6P08133 673 aa16.01■□□□□ 0.15
HERPUD1-215ENST00000568676 PON1P27169 355 aa16.01■□□□□ 0.15
HERPUD1-215ENST00000568676 BLKP51451 505 aa16.01■□□□□ 0.15
HERPUD1-215ENST00000568676 RNASE9P60153 205 aaKnown RBP16.01■□□□□ 0.15
HERPUD1-215ENST00000568676 ARF5P84085 180 aa16.01■□□□□ 0.15
HERPUD1-215ENST00000568676 SPIDRQ14159 915 aa16.01■□□□□ 0.15
HERPUD1-215ENST00000568676 LY6DQ14210 128 aa16.01■□□□□ 0.15
HERPUD1-215ENST00000568676 POLD3Q15054 466 aaPredicted RBP16.01■□□□□ 0.15
HERPUD1-215ENST00000568676 ZNF805Q5CZA5 627 aa16.01■□□□□ 0.15
HERPUD1-215ENST00000568676 SDR16C5Q8N3Y7 309 aa16.01■□□□□ 0.15
HERPUD1-215ENST00000568676 SCG3Q8WXD2 468 aaKnown RBP16.01■□□□□ 0.15
HERPUD1-215ENST00000568676 LIN37Q96GY3 246 aaPredicted RBP16.01■□□□□ 0.15
HERPUD1-215ENST00000568676 TBCBQ99426 244 aa16.01■□□□□ 0.15
HERPUD1-215ENST00000568676 SEMA4CQ9C0C4 833 aa16.01■□□□□ 0.15
HERPUD1-215ENST00000568676 PDCL3Q9H2J4 239 aa16.01■□□□□ 0.15
HERPUD1-215ENST00000568676 ZDHHC6Q9H6R6 413 aa16.01■□□□□ 0.15
HERPUD1-215ENST00000568676 KLF15Q9UIH9 416 aa16.01■□□□□ 0.15
HERPUD1-215ENST00000568676 RWDD2AQ9UIY3 292 aa16.01■□□□□ 0.15
HERPUD1-215ENST00000568676 A0A1W2PNU3 283 aaPredicted RBP16■□□□□ 0.15
HERPUD1-215ENST00000568676 MUSKO15146 869 aa16■□□□□ 0.15
HERPUD1-215ENST00000568676 SPINT1O43278 529 aa16■□□□□ 0.15
HERPUD1-215ENST00000568676 TNFSF15O95150 251 aa16■□□□□ 0.15
HERPUD1-215ENST00000568676 GSRP00390 522 aa16■□□□□ 0.15
HERPUD1-215ENST00000568676 TFE3P19532 575 aaPredicted RBP16■□□□□ 0.15
HERPUD1-215ENST00000568676 CLCN1P35523 988 aa16■□□□□ 0.15
HERPUD1-215ENST00000568676 SNRPD1P62314 119 aaKnown RBP16■□□□□ 0.15
HERPUD1-215ENST00000568676 KCNC4Q03721 635 aa16■□□□□ 0.15
HERPUD1-215ENST00000568676 EIF2B5Q13144 721 aaKnown RBP16■□□□□ 0.15
HERPUD1-215ENST00000568676 ARL13BQ3SXY8 428 aa16■□□□□ 0.15
HERPUD1-215ENST00000568676 PRRT3Q5FWE3 981 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms