RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 TRIM68Q6AZZ1 485 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 LVRNQ6Q4G3 990 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 ARHGAP36Q6ZRI8 547 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 BEND5Q7L4P6 421 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 ZDHHC6Q9H6R6 413 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 TDP1Q9NUW8 608 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 CHKBQ9Y259 395 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 SCN10AQ9Y5Y9 1956 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 TCRBV9S1A1TA0A576 114 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 AP2A1O95782 977 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 MYOGP15173 224 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 GLRBP48167 497 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 ERVFC1P60507 584 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 RING1Q06587 406 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 IL10RBQ08334 325 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 PDAP1Q13442 181 aaKnown RBP12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 TTMPQ5BVD1 217 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 SDE2Q6IQ49 451 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 LRRC8BQ6P9F7 803 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 GRIN3AQ8TCU5 1115 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 IGSF8Q969P0 613 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 SGSM3Q96HU1 749 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 C1orf74Q96LT6 269 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 TASP1Q9H6P5 420 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 CRLS1Q9UJA2 301 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 TCP11X1B4DZS4 312 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 GLP2RO95838 553 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 PYGBP11216 843 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 VAV1P15498 845 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 TAC1P20366 129 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 AKT1P31749 480 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 GRIA1P42261 906 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 GAD2Q05329 585 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 SLC10A7Q0GE19 358 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 GALNT2Q10471 571 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 ZNF470Q6ECI4 717 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 RNF217Q8TC41 542 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 PGM2Q96G03 612 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 SAMD11Q96NU1 681 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 CRISPLD1Q9H336 500 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 OSER1Q9NX31 292 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 PCDHB9Q9Y5E1 797 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 HIDE1A8MVS5 230 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 DCLK1O15075 740 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 ITGB8P26012 769 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 SNRPD1P62314 119 aaKnown RBP12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 FNDC3BQ53EP0 1204 aaKnown RBP12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 MSANTD2Q6P1R3 559 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 MRPL43Q8N983 215 aaKnown RBP12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 NAT8LQ8N9F0 302 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 RPL10LQ96L21 214 aaKnown RBP12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 FAM111AQ96PZ2 611 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 FAM167BQ9BTA0 163 aa12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 DUS2Q9NX74 493 aaKnown RBP12.3□□□□□ -0.44
TMEM170A-205ENST00000568559 DNAJC6O75061 913 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 STC2O76061 302 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 EPCAMP16422 314 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 IL4RP24394 825 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 SERPINA4P29622 427 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 GP5P40197 560 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 DPYSQ14117 519 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 SCML4Q8N228 414 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 LEMD2Q8NC56 503 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 PBXIP1Q96AQ6 731 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 DCUN1D1Q96GG9 259 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 EGFL8Q99944 293 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 VPS45Q9NRW7 570 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 PPARGC1AQ9UBK2 798 aaKnown RBP12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 PCDHA11Q9Y5I1 949 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 KPNA3O00505 521 aaPredicted RBP12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 TNFRSF10BO14763 440 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 GRM6O15303 877 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 TIMM44O43615 452 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 DIAPH2O60879 1101 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 HSPA4LO95757 839 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 ADH1CP00326 375 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 ABHD2P08910 425 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 ITGB6P18564 788 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 CHRM3P20309 590 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 ABL2P42684 1182 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 KDM7AQ6ZMT4 941 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 UNC5AQ6ZN44 842 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 ARMC2Q8NEN0 867 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 TSPAN17Q96FV3 270 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 CERS2Q96G23 380 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 SLC25A51Q9H1U9 297 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 USP29Q9HBJ7 922 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 UTP6Q9NYH9 597 aaKnown RBP12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 FNIP2Q9P278 1114 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 IGSF9Q9P2J2 1179 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 GRID1Q9ULK0 1009 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 OCRLQ01968 901 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 ZBTB17Q13105 803 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 MRPL58Q14197 206 aaKnown RBP12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 TCTN1Q2MV58 587 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 SH2D4BQ5SQS7 431 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 THEMIS2Q5TEJ8 643 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 PDPK2PQ6A1A2 396 aa12.29□□□□□ -0.44
TMEM170A-205ENST00000568559 PTRHD1Q6GMV3 140 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms