RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 STC2O76061 302 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 CXCL14O95715 111 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 FGF19O95750 216 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 OLFM2O95897 454 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 FAM107AO95990 144 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 LRG1P02750 347 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 CNPP09543 421 aaKnown RBP14.84□□□□□ -0.03
COMMD4-221ENST00000567935 HOXB8P17481 243 aaPredicted RBP14.84□□□□□ -0.03
COMMD4-221ENST00000567935 MGAT1P26572 445 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 OR1E1P30953 314 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 SESN2P58004 480 aaPredicted RBP14.84□□□□□ -0.03
COMMD4-221ENST00000567935 ALFQ53S48 1182 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 ADGRF1Q5T601 910 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 MARC1Q5VT66 337 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 NADSYN1Q6IA69 706 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 LILRA6Q6PI73 481 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 ZNF783Q6ZMS7 281 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 MARK2Q7KZI7 788 aaKnown RBP14.84□□□□□ -0.03
COMMD4-221ENST00000567935 TMC7Q7Z402 723 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 TFAP2DQ7Z6R9 452 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 LGI2Q8N0V4 545 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 SIX5Q8N196 739 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 BBS5Q8N3I7 341 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 DNAAF3Q8N9W5 541 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 SUMF1Q8NBK3 374 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 BCAS4Q8TDM0 211 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 MRPS31Q92665 395 aaKnown RBP14.84□□□□□ -0.03
COMMD4-221ENST00000567935 HMCESQ96FZ2 354 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 GORASP1Q9BQQ3 440 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 KCNK9Q9NPC2 374 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 NDFIP2Q9NV92 336 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 NYNRINQ9P2P1 1898 aaKnown RBP14.84□□□□□ -0.03
COMMD4-221ENST00000567935 CHD5Q8TDI0 1954 aa14.84□□□□□ -0.03
COMMD4-221ENST00000567935 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.83□□□□□ -0.04
COMMD4-221ENST00000567935 FAM237BA0A1B0GVD1 139 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 CNTN5O94779 1100 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 USP1O94782 785 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 ZWINTO95229 277 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 MT-ND3P03897 115 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 F11P03951 625 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 SNRPAP09012 282 aaKnown RBP14.83□□□□□ -0.04
COMMD4-221ENST00000567935 CDC25CP30307 473 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 CORO1AP31146 461 aaKnown RBP14.83□□□□□ -0.04
COMMD4-221ENST00000567935 GRIA1P42261 906 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 MGAT5Q09328 741 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 SERINC3Q13530 473 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 CRYMQ14894 314 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 SLC14A2Q15849 920 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 FAM133BQ5BKY9 247 aaKnown RBP14.83□□□□□ -0.04
COMMD4-221ENST00000567935 ARHGAP36Q6ZRI8 547 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 SETD3Q86TU7 594 aaPredicted RBP14.83□□□□□ -0.04
COMMD4-221ENST00000567935 CTAGE3PQ8IX95 158 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 PPM1NQ8N819 430 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 OR52K1Q8NGK4 314 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 MDM1Q8TC05 714 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 DYDC1Q8WWB3 177 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 NECTIN4Q96NY8 510 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 KLHL5Q96PQ7 755 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 GCNAQ96QF7 691 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 TBL1YQ9BQ87 522 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 PLAC1Q9HBJ0 212 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 SYBUQ9NX95 663 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 ZNF510Q9Y2H8 683 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 FANCMQ8IYD8 2048 aa14.83□□□□□ -0.04
COMMD4-221ENST00000567935 A0A1B0GVM2 712 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 ILVBLA1L0T0 632 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 TCAF2A6NFQ2 919 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 HIDE1A8MVS5 230 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 NDUFAB1O14561 156 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 TM9SF1O15321 606 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 TGM5O43548 720 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 PRAMEF11O60813 436 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 PEX11BO96011 259 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 HLA-DQB2P05538 268 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 SP9P0CG40 484 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 MBL2P11226 248 aaPredicted RBP14.82□□□□□ -0.04
COMMD4-221ENST00000567935 IL9RQ01113 521 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 MTM1Q13496 603 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 RFTN1Q14699 578 aaPredicted RBP14.82□□□□□ -0.04
COMMD4-221ENST00000567935 EFTUD2Q15029 972 aaKnown RBP eCLIP14.82□□□□□ -0.041e-7■■■■■ 52.3
COMMD4-221ENST00000567935 ZSCAN26Q16670 478 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 TTC19Q6DKK2 380 aaPredicted RBP14.82□□□□□ -0.04
COMMD4-221ENST00000567935 ZC3H14Q6PJT7 736 aaKnown RBP14.82□□□□□ -0.04
COMMD4-221ENST00000567935 POTEHQ6S545 545 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 TMEM135Q86UB9 458 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 SPATS2Q86XZ4 545 aaKnown RBP14.82□□□□□ -0.04
COMMD4-221ENST00000567935 DENND1CQ8IV53 801 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 MPP5Q8N3R9 675 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 MZB1Q8WU39 189 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 AUTS2Q8WXX7 1259 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 CHMP6Q96FZ7 201 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 OXNAD1Q96HP4 312 aaPredicted RBP14.82□□□□□ -0.04
COMMD4-221ENST00000567935 NSRP1Q9H0G5 558 aaKnown RBP14.82□□□□□ -0.04
COMMD4-221ENST00000567935 IL21Q9HBE4 155 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 MRM3Q9HC36 420 aaKnown RBP14.82□□□□□ -0.04
COMMD4-221ENST00000567935 NSMCE4AQ9NXX6 385 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 FBXL21Q9UKT6 434 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 SOX13Q9UN79 622 aa14.82□□□□□ -0.04
COMMD4-221ENST00000567935 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.81□□□□□ -0.04
COMMD4-221ENST00000567935 TYW5A2RUC4 315 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms