RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 C10orf120Q5SQS8 335 aa12.53□□□□□ -0.4
CSPG4P13-202ENST00000567704 ANKS1BQ7Z6G8 1248 aa12.53□□□□□ -0.4
CSPG4P13-202ENST00000567704 C17orf50Q8WW18 174 aa12.53□□□□□ -0.4
CSPG4P13-202ENST00000567704 FDXACB1Q9BRP7 624 aaPredicted RBP12.53□□□□□ -0.4
CSPG4P13-202ENST00000567704 DYRK4Q9NR20 520 aa12.53□□□□□ -0.4
CSPG4P13-202ENST00000567704 DNAJB4Q9UDY4 337 aa12.53□□□□□ -0.4
CSPG4P13-202ENST00000567704 WBP11Q9Y2W2 641 aaKnown RBP12.53□□□□□ -0.4
CSPG4P13-202ENST00000567704 FMN2Q9NZ56 1722 aa12.53□□□□□ -0.4
CSPG4P13-202ENST00000567704 MGAT4DA6NG13 374 aa12.53□□□□□ -0.4
CSPG4P13-202ENST00000567704 VTNP04004 478 aa12.53□□□□□ -0.4
CSPG4P13-202ENST00000567704 MLNP12872 115 aa12.53□□□□□ -0.4
CSPG4P13-202ENST00000567704 ITGB6P18564 788 aa12.53□□□□□ -0.4
CSPG4P13-202ENST00000567704 TSNQ15631 228 aaKnown RBP12.53□□□□□ -0.4
CSPG4P13-202ENST00000567704 ZSWIM7Q19AV6 140 aa12.53□□□□□ -0.4
CSPG4P13-202ENST00000567704 ZPBP2Q6X784 338 aa12.53□□□□□ -0.4
CSPG4P13-202ENST00000567704 FAM183BPQ6ZVS7 135 aa12.53□□□□□ -0.4
CSPG4P13-202ENST00000567704 FGD2Q7Z6J4 655 aa12.53□□□□□ -0.4
CSPG4P13-202ENST00000567704 OR2T34Q8NGX1 318 aa12.53□□□□□ -0.4
CSPG4P13-202ENST00000567704 OR2T3Q8NH03 318 aa12.53□□□□□ -0.4
CSPG4P13-202ENST00000567704 ZDHHC15Q96MV8 337 aa12.53□□□□□ -0.4
CSPG4P13-202ENST00000567704 PDGFCQ9NRA1 345 aa12.53□□□□□ -0.4
CSPG4P13-202ENST00000567704 CRNNQ9UBG3 495 aaPredicted RBP12.53□□□□□ -0.4
CSPG4P13-202ENST00000567704 FAM50BQ9Y247 325 aa12.53□□□□□ -0.4
CSPG4P13-202ENST00000567704 GNG14A0A1W2PPG7 69 aa12.52□□□□□ -0.4
CSPG4P13-202ENST00000567704 DYNC1LI2O43237 492 aaPredicted RBP12.52□□□□□ -0.4
CSPG4P13-202ENST00000567704 KRT6AP02538 564 aa12.52□□□□□ -0.4
CSPG4P13-202ENST00000567704 MMP8P22894 467 aa12.52□□□□□ -0.4
CSPG4P13-202ENST00000567704 TKTP29401 623 aaKnown RBP12.52□□□□□ -0.4
CSPG4P13-202ENST00000567704 NNMTP40261 264 aa12.52□□□□□ -0.4
CSPG4P13-202ENST00000567704 SLC26A3P40879 764 aa12.52□□□□□ -0.4
CSPG4P13-202ENST00000567704 SRP54P61011 504 aaKnown RBP12.52□□□□□ -0.4
CSPG4P13-202ENST00000567704 RAB10P61026 200 aa12.52□□□□□ -0.4
CSPG4P13-202ENST00000567704 MILR1Q7Z6M3 343 aa12.52□□□□□ -0.4
CSPG4P13-202ENST00000567704 ZDHHC17Q8IUH5 632 aa12.52□□□□□ -0.4
CSPG4P13-202ENST00000567704 UXS1Q8NBZ7 420 aa12.52□□□□□ -0.4
CSPG4P13-202ENST00000567704 TMCC2O75069 709 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 TCEA3O75764 348 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 ABCB1P08183 1280 aaPredicted RBP12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 SLC2A3P11169 496 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 IDH3AP50213 366 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 ARPC4P59998 168 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 CDC42EP1Q00587 391 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 GRIK5Q16478 980 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 SPRED3Q2MJR0 410 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 ZFP69Q49AA0 526 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 PCID2Q5JVF3 399 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 GCNT7Q6ZNI0 430 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 ERI1Q8IV48 349 aaKnown RBP12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 ANKRD13AQ8IZ07 590 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 ZBTB8BQ8NAP8 495 aaPredicted RBP12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 TADA1Q96BN2 335 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 MRPL57Q9BQC6 102 aaKnown RBP12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 LIN28AQ9H9Z2 209 aaKnown RBP12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 MORF4L1Q9UBU8 362 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 C19orf81C9J6K1 198 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 TOR1BO14657 336 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 PAPSS1O43252 624 aaPredicted RBP12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 CYP4B1P13584 511 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 S100A3P33764 101 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 HALP42357 657 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 CDKN2BP42772 138 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 HPCAP84074 193 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 CASP12Q6UXS9 341 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 ZNF621Q6ZSS3 439 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 ANKRD23Q86SG2 305 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 TBC1D21Q8IYX1 336 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 NKX2-3Q8TAU0 364 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 SIX2Q9NPC8 291 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 SLC38A7Q9NVC3 462 aa12.52□□□□□ -0.41
CSPG4P13-202ENST00000567704 LACTBL1A8MY62 500 aa12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 MYL12BO14950 172 aa12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 PLIN3O60664 434 aa12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 CNPP09543 421 aaKnown RBP12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 NFKB1P19838 968 aa12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 MAD2L1Q13257 205 aaPredicted RBP12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 NOMO1Q15155 1222 aa12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 ARL13AQ5H913 290 aaPredicted RBP12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 C6orf183Q5T699 404 aa12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 PPP4R4Q6NUP7 873 aa12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 KCTD8Q6ZWB6 473 aa12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 TMEM132CQ8N3T6 1108 aa12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 ZNF781Q8N8C0 355 aa12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 RDH11Q8TC12 318 aa12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 SMPD3Q9NY59 655 aaPredicted RBP12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 MAP3K20Q9NYL2 800 aaKnown RBP12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 SH3BP4Q9P0V3 963 aa12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 ZNF624Q9P2J8 865 aaPredicted RBP12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 SNCAIPQ9Y6H5 919 aa12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 U3KQV3 271 aa12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 TADA2AO75478 443 aa12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 ENDOD1O94919 500 aa12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 FBXO21O94952 628 aa12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 KCNH1O95259 989 aa12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 IFNA14P01570 189 aa12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 GRK3P35626 688 aa12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 RPS7P62081 194 aaKnown RBP12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 TFAP2DQ7Z6R9 452 aa12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 SLC2A14Q8TDB8 520 aa12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 ZNF512Q96ME7 567 aaPredicted RBP12.51□□□□□ -0.41
CSPG4P13-202ENST00000567704 PANX3Q96QZ0 392 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms