RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 PHACTR2O75167 634 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 GCATO75600 419 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 GCNT3O95395 438 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 NADKO95544 446 aaPredicted RBP9.92□□□□□ -0.82
CAPN3-216ENST00000567071 CST3P01034 146 aaPredicted RBP9.92□□□□□ -0.82
CAPN3-216ENST00000567071 ALPIP09923 528 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 DLATP10515 647 aaKnown RBP9.92□□□□□ -0.82
CAPN3-216ENST00000567071 CCL4P13236 92 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 P4HA1P13674 534 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 MAP4P27816 1152 aaKnown RBP9.92□□□□□ -0.82
CAPN3-216ENST00000567071 PRCPP42785 496 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 CTSOP43234 321 aaPredicted RBP9.92□□□□□ -0.82
CAPN3-216ENST00000567071 SLC11A2P49281 568 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 SGSHP51688 502 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 ELOCQ15369 112 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 EFHC2Q5JST6 749 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 FAXCQ5TGI0 409 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 LVRNQ6Q4G3 990 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 SCARA5Q6ZMJ2 495 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 RD3Q7Z3Z2 195 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 KDELC2Q7Z4H8 507 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 PHACTR4Q8IZ21 702 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 RBFAQ8N0V3 343 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 NLGN4XQ8N0W4 816 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 FSTL5Q8N475 847 aaPredicted RBP9.92□□□□□ -0.82
CAPN3-216ENST00000567071 NLGN4YQ8NFZ3 816 aaPredicted RBP9.92□□□□□ -0.82
CAPN3-216ENST00000567071 RNF139Q8WU17 664 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 BMFQ96LC9 184 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 DDX50Q9BQ39 737 aaKnown RBP9.92□□□□□ -0.82
CAPN3-216ENST00000567071 CBWD1Q9BRT8 395 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 LRRC61Q9BV99 259 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 DNAI2Q9GZS0 605 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 SLAMF7Q9NQ25 335 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 INTS6Q9UL03 887 aaKnown RBP9.92□□□□□ -0.82
CAPN3-216ENST00000567071 GPR34Q9UPC5 381 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 NAALADL1Q9UQQ1 740 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 POLHQ9Y253 713 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 DAAM1Q9Y4D1 1078 aa9.92□□□□□ -0.82
CAPN3-216ENST00000567071 PPP1R3GB7ZBB8 358 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 PRSS44E7EML9 344 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 INPP4BO15327 924 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 LRCH4O75427 683 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 TSHRP16473 764 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 PTGER4P35408 488 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 ZNF165P49910 485 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 BLKP51451 505 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 PGDP52209 483 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 STX17P56962 302 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 TAS2R38P59533 333 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 YWHAGP61981 247 aaKnown RBP eCLIP9.91□□□□□ -0.82
CAPN3-216ENST00000567071 SULT2A1Q06520 285 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 STIM1Q13586 685 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 ARHGEF7Q14155 803 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 C16orf72Q14CZ0 275 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 ZNF699Q32M78 642 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 ACCSLQ4AC99 568 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 ZNF667Q5HYK9 610 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 PIK3R6Q5UE93 754 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 RFWD3Q6PCD5 774 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 PIM3Q86V86 326 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 SLITRK4Q8IW52 837 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 NELFCDQ8IXH7 590 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 AOPEPQ8N6M6 819 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 MLKLQ8NB16 471 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 NELFBQ8WX92 580 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 DDA1Q9BW61 102 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 SLC17A9Q9BYT1 436 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 NAT10Q9H0A0 1025 aaKnown RBP9.91□□□□□ -0.82
CAPN3-216ENST00000567071 RBSNQ9H1K0 784 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 KIAA1586Q9HCI6 787 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 OLFML3Q9NRN5 406 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 TLK1Q9UKI8 766 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 SARDHQ9UL12 918 aa9.91□□□□□ -0.82
CAPN3-216ENST00000567071 PKDREJQ9NTG1 2253 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 TRIM49BA6NDI0 452 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 KPNA3O00505 521 aaPredicted RBP9.9□□□□□ -0.82
CAPN3-216ENST00000567071 PSMA7O14818 248 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 ZW10O43264 779 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 PPP1R37O75864 691 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 SORBS2O94875 1100 aaKnown RBP9.9□□□□□ -0.82
CAPN3-216ENST00000567071 CTSEP14091 401 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 VAV1P15498 845 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 MAN1A1P33908 653 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 STK19P49842 368 aaPredicted RBP9.9□□□□□ -0.82
CAPN3-216ENST00000567071 NDST1P52848 882 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 RNASE9P60153 205 aaKnown RBP9.9□□□□□ -0.82
CAPN3-216ENST00000567071 MYL6P60660 151 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 RPS21P63220 83 aaKnown RBP9.9□□□□□ -0.82
CAPN3-216ENST00000567071 KCNA1Q09470 495 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 EIF2B5Q13144 721 aaKnown RBP9.9□□□□□ -0.82
CAPN3-216ENST00000567071 PAK1Q13153 545 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 SGCGQ13326 291 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 ALCAMQ13740 583 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 DCAF12Q5T6F0 453 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 PIP5KL1Q5T9C9 394 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 SEL1L3Q68CR1 1132 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 KIAA1161Q6NSJ0 714 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 EPM2AIP1Q7L775 607 aaPredicted RBP9.9□□□□□ -0.82
CAPN3-216ENST00000567071 ZSCAN30Q86W11 494 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 GKN2Q86XP6 184 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms