RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 RAP2CQ9Y3L5 183 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 C9IYK1 514 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 E7ESA3 106 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 PQBP1O60828 265 aaKnown RBP11.72□□□□□ -0.53
CDH1-210ENST00000566612 MBL2P11226 248 aaPredicted RBP11.72□□□□□ -0.53
CDH1-210ENST00000566612 ME2P23368 584 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 GJA9P57773 515 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 KCNK10P57789 538 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 GALNT3Q14435 633 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 FBXO48Q5FWF7 155 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 MARK2Q7KZI7 788 aaKnown RBP11.72□□□□□ -0.53
CDH1-210ENST00000566612 NET1Q7Z628 596 aaPredicted RBP11.72□□□□□ -0.53
CDH1-210ENST00000566612 CATSPER1Q8NEC5 780 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 JADE3Q92613 823 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 TEKT5Q96M29 485 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 OLFM3Q96PB7 478 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 SEMA6AQ9H2E6 1030 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 CRTAC1Q9NQ79 661 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 TRPM5Q9NZQ8 1165 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 VTI1BQ9UEU0 232 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 SORCS3Q9UPU3 1222 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 TTC24A2A3L6 582 aaPredicted RBP11.72□□□□□ -0.53
CDH1-210ENST00000566612 PIRO00625 290 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 KIF1CO43896 1103 aaKnown RBP11.72□□□□□ -0.53
CDH1-210ENST00000566612 VPS26AO75436 327 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 RFPL1O75677 317 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 TRIM16O95361 564 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 CRTAMO95727 393 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 KLF10Q13118 480 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 CAPRIN1Q14444 709 aaKnown RBP11.72□□□□□ -0.53
CDH1-210ENST00000566612 LBRQ14739 615 aaKnown RBP11.72□□□□□ -0.53
CDH1-210ENST00000566612 RGMBQ6NW40 437 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 SCIMPQ6UWF3 145 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.72□□□□□ -0.53
CDH1-210ENST00000566612 MAGEC3Q8TD91 643 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 CYGBQ8WWM9 190 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 MIEF2Q96C03 454 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 PRR11Q96HE9 360 aaPredicted RBP11.72□□□□□ -0.53
CDH1-210ENST00000566612 TMEM169Q96HH4 297 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 FAR2Q96K12 515 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 LENG8Q96PV6 779 aaPredicted RBP11.72□□□□□ -0.53
CDH1-210ENST00000566612 POLR1EQ9GZS1 481 aaKnown RBP11.72□□□□□ -0.53
CDH1-210ENST00000566612 FAM124BQ9H5Z6 455 aaPredicted RBP11.72□□□□□ -0.53
CDH1-210ENST00000566612 CYLDQ9NQC7 956 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 KANSL3Q9P2N6 904 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 ADAMTSL1Q8N6G6 1762 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 DUSP11O75319 330 aaKnown RBP11.71□□□□□ -0.53
CDH1-210ENST00000566612 CABYRO75952 493 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 TBX18O95935 607 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 CKMP06732 381 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 CHRNGP07510 517 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 ATP6V1C1P21283 382 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 ATP5F1P24539 256 aaPredicted RBP11.71□□□□□ -0.53
CDH1-210ENST00000566612 GJA5P36382 358 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 GRIK3Q13003 919 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 MOGSQ13724 837 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 GRB14Q14449 540 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 INPP5AQ14642 412 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 TRNP1Q6NT89 227 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 OR6Y1Q8NGX8 325 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 MOCOSQ96EN8 888 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 NPY6RQ99463 290 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 TRMT13Q9NUP7 481 aaKnown RBP11.71□□□□□ -0.53
CDH1-210ENST00000566612 GEMIN8Q9NWZ8 242 aaKnown RBP11.71□□□□□ -0.53
CDH1-210ENST00000566612 GMIPQ9P107 970 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 THEGQ9P2T0 379 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 KATNA1O75449 491 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 TM7SF2O76062 418 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 LTA4HP09960 611 aaKnown RBP11.71□□□□□ -0.53
CDH1-210ENST00000566612 PRKCHP24723 683 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 TAF10Q12962 218 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 DUSP4Q13115 394 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 KRT72Q14CN4 511 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 LPCAT4Q643R3 524 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 POTEHQ6S545 545 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 MON1AQ86VX9 555 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 B3GALT6Q96L58 329 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 SLC39A8Q9C0K1 460 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 ADAMTS10Q9H324 1103 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 BPIFA1Q9NP55 256 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 SEMA4BQ9NPR2 832 aaPredicted RBP11.71□□□□□ -0.53
CDH1-210ENST00000566612 GDAP2Q9NXN4 497 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 IGSF9Q9P2J2 1179 aa11.71□□□□□ -0.53
CDH1-210ENST00000566612 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.71□□□□□ -0.53
CDH1-210ENST00000566612 RGSL1A5PLK6 1076 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 NEMP2A6NFY4 417 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 E9PAM4 449 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 MRASO14807 208 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 GUCA1CO95843 209 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 MYL4P12829 197 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 PIK3R1P27986 724 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 GLUD2P49448 558 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 NEK3P51956 506 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 AIF1P55008 147 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 RHOAP61586 193 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 FKBP1BP68106 108 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 DSC2Q02487 901 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 ITGA7Q13683 1181 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 GLT6D1Q7Z4J2 308 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 UBR7Q8N806 425 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms