RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 NUMBP49757 651 aa12.82□□□□□ -0.36
SF3B3-206ENST00000565990 EIF3EP60228 445 aaKnown RBP12.82□□□□□ -0.36
SF3B3-206ENST00000565990 CAMK2GQ13555 558 aaPredicted RBP12.82□□□□□ -0.36
SF3B3-206ENST00000565990 LBRQ14739 615 aaKnown RBP12.82□□□□□ -0.36
SF3B3-206ENST00000565990 OASLQ15646 514 aaKnown RBP12.82□□□□□ -0.36
SF3B3-206ENST00000565990 CRY1Q16526 586 aa12.82□□□□□ -0.36
SF3B3-206ENST00000565990 CYP1B1Q16678 543 aa12.82□□□□□ -0.36
SF3B3-206ENST00000565990 FNDC3BQ53EP0 1204 aaKnown RBP12.82□□□□□ -0.36
SF3B3-206ENST00000565990 SLC45A4Q5BKX6 768 aa12.82□□□□□ -0.36
SF3B3-206ENST00000565990 CARD16Q5EG05 197 aa12.82□□□□□ -0.36
SF3B3-206ENST00000565990 EOGTQ5NDL2 527 aa12.82□□□□□ -0.36
SF3B3-206ENST00000565990 SERPINA13PQ6UXR4 307 aa12.82□□□□□ -0.36
SF3B3-206ENST00000565990 ZNF354CQ86Y25 554 aa12.82□□□□□ -0.36
SF3B3-206ENST00000565990 PGBD5Q8N414 524 aa12.82□□□□□ -0.36
SF3B3-206ENST00000565990 PCDH20Q8N6Y1 951 aaKnown RBP12.82□□□□□ -0.36
SF3B3-206ENST00000565990 PRELID2Q8N945 189 aa12.82□□□□□ -0.36
SF3B3-206ENST00000565990 CCNYQ8ND76 341 aa12.82□□□□□ -0.36
SF3B3-206ENST00000565990 OR2A12Q8NGT7 310 aa12.82□□□□□ -0.36
SF3B3-206ENST00000565990 FAM129BQ96TA1 746 aa12.82□□□□□ -0.36
SF3B3-206ENST00000565990 SP110Q9HB58 689 aa12.82□□□□□ -0.36
SF3B3-206ENST00000565990 ZDHHC4Q9NPG8 344 aa12.82□□□□□ -0.36
SF3B3-206ENST00000565990 PRSS16Q9NQE7 514 aa12.82□□□□□ -0.36
SF3B3-206ENST00000565990 CACNA2D2Q9NY47 1150 aa12.82□□□□□ -0.36
SF3B3-206ENST00000565990 GOLGA6AQ9NYA3 693 aa12.82□□□□□ -0.36
SF3B3-206ENST00000565990 SLC8A2Q9UPR5 921 aa12.82□□□□□ -0.36
SF3B3-206ENST00000565990 ATP8A1Q9Y2Q0 1164 aa12.82□□□□□ -0.36
SF3B3-206ENST00000565990 ANKRD36A6QL64 1941 aa12.82□□□□□ -0.36
SF3B3-206ENST00000565990 CACNA1IQ9P0X4 2223 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 EDDM13A0A1B0GTR0 161 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 PGRMC1O00264 195 aaKnown RBP12.81□□□□□ -0.36
SF3B3-206ENST00000565990 ZNF189O75820 626 aaPredicted RBP12.81□□□□□ -0.36
SF3B3-206ENST00000565990 TMCC1O94876 653 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 GSRP00390 522 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 ITGAVP06756 1048 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 RBP3P10745 1247 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 VAV1P15498 845 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 CR2P20023 1033 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 STIP1P31948 543 aaKnown RBP12.81□□□□□ -0.36
SF3B3-206ENST00000565990 AP1B1Q10567 949 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 WASHC5Q12768 1159 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 MTAPQ13126 283 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 TEX44Q53QW1 395 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 KIAA1211LQ6NV74 962 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 TMEM92Q6UXU6 159 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 SRLQ86TD4 932 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 CNTD1Q8N815 330 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 TMEM105Q8N8V8 129 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 C12orf50Q8NA57 414 aaPredicted RBP12.81□□□□□ -0.36
SF3B3-206ENST00000565990 NSMCE1Q8WV22 266 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 HTR3CQ8WXA8 447 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 LRRC45Q96CN5 670 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 HAUS1Q96CS2 278 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 ZNF419Q96HQ0 510 aaPredicted RBP12.81□□□□□ -0.36
SF3B3-206ENST00000565990 QKIQ96PU8 341 aaKnown RBP eCLIP12.81□□□□□ -0.36
SF3B3-206ENST00000565990 VAT1Q99536 393 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 C2orf42Q9NWW7 574 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 SEPT3Q9UH03 358 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 DMGDHQ9UI17 866 aaKnown RBP12.81□□□□□ -0.36
SF3B3-206ENST00000565990 DNPEPQ9ULA0 475 aa12.81□□□□□ -0.36
SF3B3-206ENST00000565990 FCF1Q9Y324 198 aaKnown RBP12.81□□□□□ -0.36
SF3B3-206ENST00000565990 PRR33A8MZF0 331 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 MUSKO15146 869 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 ALOX15BO15296 676 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 POP4O95707 220 aaKnown RBP12.8□□□□□ -0.36
SF3B3-206ENST00000565990 JCHAINP01591 159 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 EPHX1P07099 455 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 HLA-EP13747 358 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 COL9A1P20849 921 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 CES1P23141 567 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 PTPN3P26045 913 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 RBL1P28749 1068 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 AVPR2P30518 371 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 HOXA6P31267 233 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 HSPA9P38646 679 aaKnown RBP12.8□□□□□ -0.36
SF3B3-206ENST00000565990 MMP13P45452 471 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 CXCL12P48061 93 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 DGKEP52429 567 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 BYSLQ13895 437 aaKnown RBP12.8□□□□□ -0.36
SF3B3-206ENST00000565990 MYLK3Q32MK0 819 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 ACCSLQ4AC99 568 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 RALGPS1Q5JS13 557 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 ALG1LQ6GMV1 187 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 C22orf39Q6P5X5 142 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 B4GALNT4Q76KP1 1039 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 ADAT2Q7Z6V5 191 aaKnown RBP12.8□□□□□ -0.36
SF3B3-206ENST00000565990 TSEN2Q8NCE0 465 aaKnown RBP12.8□□□□□ -0.36
SF3B3-206ENST00000565990 TMIEQ8NEW7 156 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 OR2AP1Q8NGE2 309 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 C1orf54Q8WWF1 131 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 RTP4Q96DX8 246 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 TEKT5Q96M29 485 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 FAM118BQ9BPY3 351 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 MGME1Q9BQP7 344 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 CPEB1Q9BZB8 566 aaKnown RBP12.8□□□□□ -0.36
SF3B3-206ENST00000565990 RSPH9Q9H1X1 276 aaPredicted RBP12.8□□□□□ -0.36
SF3B3-206ENST00000565990 MTG2Q9H4K7 406 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 POLR3BQ9NW08 1133 aaPredicted RBP12.8□□□□□ -0.36
SF3B3-206ENST00000565990 RBM22Q9NW64 420 aaKnown RBP eCLIP12.8□□□□□ -0.36
SF3B3-206ENST00000565990 LHX3Q9UBR4 397 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 PPM1HQ9ULR3 514 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms