RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 TM6SF2Q9BZW4 377 aa7.9□□□□□ -1.14
CDH1-208ENST00000565810 RAB17Q9H0T7 212 aa7.9□□□□□ -1.14
CDH1-208ENST00000565810 GBA3Q9H227 469 aa7.9□□□□□ -1.14
CDH1-208ENST00000565810 TNKS2Q9H2K2 1166 aa7.9□□□□□ -1.14
CDH1-208ENST00000565810 TMEM245Q9H330 911 aa7.9□□□□□ -1.14
CDH1-208ENST00000565810 TBC1D17Q9HA65 648 aa7.9□□□□□ -1.14
CDH1-208ENST00000565810 RRAGDQ9NQL2 400 aaPredicted RBP7.9□□□□□ -1.14
CDH1-208ENST00000565810 RAB6BQ9NRW1 208 aa7.9□□□□□ -1.14
CDH1-208ENST00000565810 ATP8A1Q9Y2Q0 1164 aa7.9□□□□□ -1.14
CDH1-208ENST00000565810 EFCAB8A8MWE9 144 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 TTI1O43156 1089 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 ANXA9O76027 345 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 KLF8O95600 359 aaPredicted RBP7.89□□□□□ -1.15
CDH1-208ENST00000565810 ZSCAN5DPP0CG00 497 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 HLA-EP13747 358 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 HOXB2P14652 356 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 NFKB1P19838 968 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 CD68P34810 354 aaPredicted RBP7.89□□□□□ -1.15
CDH1-208ENST00000565810 RPL22P35268 128 aaKnown RBP7.89□□□□□ -1.15
CDH1-208ENST00000565810 WASP42768 502 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 PTGIRP43119 386 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 MAGEA9P43362 315 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 CCNHP51946 323 aaPredicted RBP7.89□□□□□ -1.15
CDH1-208ENST00000565810 GEMP55040 296 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 BASP1P80723 227 aaKnown RBP7.89□□□□□ -1.15
CDH1-208ENST00000565810 SARNPP82979 210 aaKnown RBP7.89□□□□□ -1.15
CDH1-208ENST00000565810 BCL2L1Q07817 233 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 SFSWAPQ12872 951 aaKnown RBP7.89□□□□□ -1.15
CDH1-208ENST00000565810 PTK6Q13882 451 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 ELAVL3Q14576 367 aaKnown RBP7.89□□□□□ -1.15
CDH1-208ENST00000565810 CFAP58Q5T655 872 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 ATXN7L2Q5T6C5 722 aaPredicted RBP7.89□□□□□ -1.15
CDH1-208ENST00000565810 FAM46CQ5VWP2 391 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 DPY19L3Q6ZPD9 716 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 TRIM67Q6ZTA4 783 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 NDUFAF2Q8N183 169 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.89□□□□□ -1.15
CDH1-208ENST00000565810 CNTD1Q8N815 330 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 IL17RCQ8NAC3 791 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 BBOF1Q8ND07 529 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 FLCNQ8NFG4 579 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 FRS2Q8WU20 508 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 EZH1Q92800 747 aaPredicted RBP7.89□□□□□ -1.15
CDH1-208ENST00000565810 MYO19Q96H55 970 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 LRIG1Q96JA1 1093 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 GABRG3Q99928 467 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 HEPHQ9BQS7 1158 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 ERP44Q9BS26 406 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 FOXQ1Q9C009 403 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 ATP13A3Q9H7F0 1226 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 FBRSQ9HAH7 460 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 ETNK1Q9HBU6 452 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 POLMQ9NP87 494 aaPredicted RBP7.89□□□□□ -1.15
CDH1-208ENST00000565810 ZDHHC4Q9NPG8 344 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 VPS45Q9NRW7 570 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 LHX3Q9UBR4 397 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 IL36AQ9UHA7 158 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 FAM153AQ9UHL3 310 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 EVLQ9UI08 416 aaPredicted RBP7.89□□□□□ -1.15
CDH1-208ENST00000565810 SIT1Q9Y3P8 196 aa7.89□□□□□ -1.15
CDH1-208ENST00000565810 HELZP42694 1942 aaKnown RBP7.88□□□□□ -1.15
CDH1-208ENST00000565810 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.88□□□□□ -1.15
CDH1-208ENST00000565810 A0A1W2PQ67 120 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 SHISA7A6NL88 538 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 ERI2A8K979 691 aaKnown RBP7.88□□□□□ -1.15
CDH1-208ENST00000565810 CHURC1-FNTBB4DL54 471 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 WASH3PC4AMC7 463 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 C1QTNF3-AMACRE9PGA6 284 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 F5H423 210 aaPredicted RBP7.88□□□□□ -1.15
CDH1-208ENST00000565810 RIOK3O14730 519 aaKnown RBP7.88□□□□□ -1.15
CDH1-208ENST00000565810 MUSKO15146 869 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 ALOX15BO15296 676 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 SIN3BO75182 1162 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 ZNF821O75541 412 aaPredicted RBP7.88□□□□□ -1.15
CDH1-208ENST00000565810 ALDH1A2O94788 518 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 METTL18O95568 372 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 PRNPP04156 253 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 CR2P20023 1033 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 PRKCHP24723 683 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 NFKBIAP25963 317 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 PSMB4P28070 264 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 SERPINA4P29622 427 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 CD86P42081 329 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 RGRP47804 291 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 NRLP54845 237 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 MRPS25P82663 173 aaKnown RBP7.88□□□□□ -1.15
CDH1-208ENST00000565810 DSC2Q02487 901 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 NIPAL4Q0D2K0 466 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 CCDC15Q0P6D6 951 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 CALCOCO2Q13137 446 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 MPP3Q13368 585 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 ENPP2Q13822 863 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 SLC14A2Q15849 920 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 ARSIQ5FYB1 569 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 TEX35Q5T0J7 233 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 C9orf64Q5T6V5 341 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 FAXCQ5TGI0 409 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 ALG1LQ6GMV1 187 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 NCEH1Q6PIU2 408 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 GDPD4Q6W3E5 623 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms