RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 DNAJC3Q13217 504 aa10.2□□□□□ -0.78
CMTM3-209ENST00000565003 IQCB1Q15051 598 aa10.2□□□□□ -0.78
CMTM3-209ENST00000565003 ATXN7L2Q5T6C5 722 aaPredicted RBP10.2□□□□□ -0.78
CMTM3-209ENST00000565003 PLEKHA7Q6IQ23 1121 aa10.2□□□□□ -0.78
CMTM3-209ENST00000565003 FBXL19Q6PCT2 694 aa10.2□□□□□ -0.78
CMTM3-209ENST00000565003 DHRS13Q6UX07 377 aa10.2□□□□□ -0.78
CMTM3-209ENST00000565003 GCNT7Q6ZNI0 430 aa10.2□□□□□ -0.78
CMTM3-209ENST00000565003 ZNF571Q7Z3V5 609 aaPredicted RBP10.2□□□□□ -0.78
CMTM3-209ENST00000565003 TMC6Q7Z403 805 aa10.2□□□□□ -0.78
CMTM3-209ENST00000565003 PLPP6Q8IY26 295 aa10.2□□□□□ -0.78
CMTM3-209ENST00000565003 OXR1Q8N573 874 aa10.2□□□□□ -0.78
CMTM3-209ENST00000565003 EID2Q8N6I1 236 aa10.2□□□□□ -0.78
CMTM3-209ENST00000565003 NETO2Q8NC67 525 aa10.2□□□□□ -0.78
CMTM3-209ENST00000565003 HMCESQ96FZ2 354 aa10.2□□□□□ -0.78
CMTM3-209ENST00000565003 KLHDC7BQ96G42 594 aa10.2□□□□□ -0.78
CMTM3-209ENST00000565003 VCPIP1Q96JH7 1222 aa10.2□□□□□ -0.78
CMTM3-209ENST00000565003 CNDP2Q96KP4 475 aaKnown RBP10.2□□□□□ -0.78
CMTM3-209ENST00000565003 TRPM6Q9BX84 2022 aa10.2□□□□□ -0.78
CMTM3-209ENST00000565003 TRIM7Q9C029 511 aa10.2□□□□□ -0.78
CMTM3-209ENST00000565003 HAUS4Q9H6D7 363 aa10.2□□□□□ -0.78
CMTM3-209ENST00000565003 GGT7Q9UJ14 662 aa10.2□□□□□ -0.78
CMTM3-209ENST00000565003 HPCAL4Q9UM19 191 aa10.2□□□□□ -0.78
CMTM3-209ENST00000565003 ITM2BQ9Y287 266 aa10.2□□□□□ -0.78
CMTM3-209ENST00000565003 FADS3Q9Y5Q0 445 aa10.2□□□□□ -0.78
CMTM3-209ENST00000565003 GOLGA4Q13439 2230 aaKnown RBP10.19□□□□□ -0.78
CMTM3-209ENST00000565003 CFAP47Q6ZTR5 3102 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 A0A1W2PQC6 194 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 FAM149AA5PLN7 773 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 C16orf96A6NNT2 1141 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 WASH4PA8MWX3 477 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 RASA4BC9J798 803 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 KRIT1O00522 736 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 RAD51BO15315 384 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 RASA4O43374 803 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 BUB1O43683 1085 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 AP1G1O43747 822 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 LDOC1O95751 146 aaPredicted RBP10.19□□□□□ -0.78
CMTM3-209ENST00000565003 GSRP00390 522 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 UGT2B4P06133 528 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 PSMA2P25787 234 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 ACADVLP49748 655 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 CLDN6P56747 220 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 SMAD1Q15797 465 aaKnown RBP10.19□□□□□ -0.78
CMTM3-209ENST00000565003 ASIC2Q16515 512 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 CA9Q16790 459 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 MYLK3Q32MK0 819 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 FILIP1LQ4L180 1135 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 ZNF805Q5CZA5 627 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 KIAA1161Q6NSJ0 714 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 ABI3BPQ7Z7G0 1075 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 PROSER1Q86XN7 944 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 ZNF354CQ86Y25 554 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 SLC22A18ASQ8N1D0 253 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 UMODL1-AS1Q8N2C9 162 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 RYBPQ8N488 228 aaPredicted RBP10.19□□□□□ -0.78
CMTM3-209ENST00000565003 ARFGAP1Q8N6T3 406 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 TSC1Q92574 1164 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 PEBP4Q96S96 227 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 EPAS1Q99814 870 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 CALN1Q9BXU9 219 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 SLC17A9Q9BYT1 436 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 PARVAQ9NVD7 372 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 AIPL1Q9NZN9 384 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 RALYQ9UKM9 306 aaKnown RBP10.19□□□□□ -0.78
CMTM3-209ENST00000565003 PKD1L2Q7Z442 2459 aa10.19□□□□□ -0.78
CMTM3-209ENST00000565003 POM121BA6NF01 834 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 TMEM191CA6NGB0 347 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 ZSCAN5CA6NGD5 496 aaPredicted RBP10.18□□□□□ -0.78
CMTM3-209ENST00000565003 DDX3XO00571 662 aaKnown RBP eCLIP10.18□□□□□ -0.783e-6■■■□□ 17.2
CMTM3-209ENST00000565003 TRIM38O00635 465 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 PAK4O96013 591 aaPredicted RBP10.18□□□□□ -0.78
CMTM3-209ENST00000565003 FTLP02792 175 aaPredicted RBP10.18□□□□□ -0.78
CMTM3-209ENST00000565003 PRKCIP41743 596 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 YBEYP58557 167 aaPredicted RBP10.18□□□□□ -0.78
CMTM3-209ENST00000565003 TPI1P60174 286 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 RHOAP61586 193 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 SNRPD1P62314 119 aaKnown RBP10.18□□□□□ -0.78
CMTM3-209ENST00000565003 RPS21P63220 83 aaKnown RBP10.18□□□□□ -0.78
CMTM3-209ENST00000565003 SERINC3Q13530 473 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 CAMK2BQ13554 666 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 NR1I3Q14994 352 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 PARP15Q460N3 678 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 LRRC73Q5JTD7 316 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 PPP1R2P3Q6NXS1 205 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 KDM7AQ6ZMT4 941 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 CYP4V2Q6ZWL3 525 aaPredicted RBP10.18□□□□□ -0.78
CMTM3-209ENST00000565003 PTAR1Q7Z6K3 402 aaPredicted RBP10.18□□□□□ -0.78
CMTM3-209ENST00000565003 GALNT15Q8N3T1 639 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 SLC25A45Q8N413 288 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 MDM1Q8TC05 714 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 LRIG1Q96JA1 1093 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 FEM1CQ96JP0 617 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 BMFQ96LC9 184 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 GDAP1L1Q96MZ0 367 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 KLHL32Q96NJ5 620 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 KLF6Q99612 283 aaPredicted RBP10.18□□□□□ -0.78
CMTM3-209ENST00000565003 SNRNP25Q9BV90 132 aaKnown RBP10.18□□□□□ -0.78
CMTM3-209ENST00000565003 DHX35Q9H5Z1 703 aaKnown RBP10.18□□□□□ -0.78
CMTM3-209ENST00000565003 CATSPERBQ9H7T0 1116 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 PDFQ9HBH1 243 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms