RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 OR6K2Q8NGY2 324 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 LOXL4Q96JB6 756 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 HINFPQ9BQA5 517 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 GPR174Q9BXC1 333 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 OSBPL1AQ9BXW6 950 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 BRD8Q9H0E9 1235 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 DUSP15Q9H1R2 295 aaPredicted RBP16.22■□□□□ 0.19
RAB40C-208ENST00000564703 DTLQ9NZJ0 730 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 NCDNQ9UBB6 729 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 EVLQ9UI08 416 aaPredicted RBP16.22■□□□□ 0.19
RAB40C-208ENST00000564703 MBD1Q9UIS9 605 aaPredicted RBP16.22■□□□□ 0.19
RAB40C-208ENST00000564703 SARDHQ9UL12 918 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 FZD4Q9ULV1 537 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 PACSIN2Q9UNF0 486 aaPredicted RBP16.22■□□□□ 0.19
RAB40C-208ENST00000564703 EFR3BQ9Y2G0 817 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 EML5Q05BV3 1969 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 THADAQ6YHU6 1953 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 hCG_1818297A0A087WSY0 165 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 GOLGA6L9A6NEM1 432 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 FAM47DPA6NHR8 397 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 MATN3O15232 486 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 TJP3O95049 919 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 MMP13P45452 471 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 CSNK1DP48730 415 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 SCNN1BP51168 640 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 ITKQ08881 620 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 SLC10A7Q0GE19 358 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 AP1B1Q10567 949 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 SLC10A2Q12908 348 aaPredicted RBP16.21■□□□□ 0.19
RAB40C-208ENST00000564703 RPS6KA1Q15418 735 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 TAZQ16635 292 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 CFAP58Q5T655 872 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 FBXL19Q6PCT2 694 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 SRLQ86TD4 932 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 CCDC13Q8IYE1 715 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 SUMF1Q8NBK3 374 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 TSEN2Q8NCE0 465 aaKnown RBP16.21■□□□□ 0.19
RAB40C-208ENST00000564703 CADM4Q8NFZ8 388 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 OR14C36Q8NHC7 312 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 HDAC11Q96DB2 347 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 HES6Q96HZ4 224 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 PSKH2Q96QS6 385 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 PHOX2BQ99453 314 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 CPEB1Q9BZB8 566 aaKnown RBP16.21■□□□□ 0.19
RAB40C-208ENST00000564703 OSBPL8Q9BZF1 889 aa16.21■□□□□ 0.19
RAB40C-208ENST00000564703 SPAG17Q6Q759 2223 aa16.21■□□□□ 0.18
RAB40C-208ENST00000564703 TBC1D3DA0A087WVF3 549 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 TBC1D3IA0A087WXS9 549 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 TBC1D3EA0A087X179 549 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 TBC1D3KA0A087X1G2 549 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 TBC1D3FA6NER0 549 aaPredicted RBP16.2■□□□□ 0.18
RAB40C-208ENST00000564703 TBC1D3LB9A6J9 549 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 SLC7A4O43246 635 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 SEMA4FO95754 770 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 CTSLP07711 333 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 TBC1D3HP0C7X1 549 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 PYGMP11217 842 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 CCNB1P14635 433 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 XPAP23025 273 aaPredicted RBP16.2■□□□□ 0.18
RAB40C-208ENST00000564703 MSNP26038 577 aaKnown RBP16.2■□□□□ 0.18
RAB40C-208ENST00000564703 ACSL1P33121 698 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 MAPK8P45983 427 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 ZNF33AQ06730 810 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 ZNF805Q5CZA5 627 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 WDR45BQ5MNZ6 344 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 PMS2CLQ68D20 193 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 TBC1D3GQ6DHY5 549 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 TBC1D3CQ6IPX1 549 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 NPNTQ6UXI9 565 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 GDPD4Q6W3E5 623 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 ERN2Q76MJ5 926 aaKnown RBP16.2■□□□□ 0.18
RAB40C-208ENST00000564703 TBC1D3Q8IZP1 549 aaPredicted RBP16.2■□□□□ 0.18
RAB40C-208ENST00000564703 AADATQ8N5Z0 425 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 ALG3Q92685 438 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 EXOC2Q96KP1 924 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 TUBGCP5Q96RT8 1024 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 FERMT1Q9BQL6 677 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 PCED1AQ9H1Q7 454 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 KCNF1Q9H3M0 494 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 KDM4CQ9H3R0 1056 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 CD93Q9NPY3 652 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 RBM22Q9NW64 420 aaKnown RBP eCLIP16.2■□□□□ 0.18
RAB40C-208ENST00000564703 LHX3Q9UBR4 397 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 WASF2Q9Y6W5 498 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 NYNRINQ9P2P1 1898 aaKnown RBP16.2■□□□□ 0.18
RAB40C-208ENST00000564703 SHROOM3Q8TF72 1996 aa16.2■□□□□ 0.18
RAB40C-208ENST00000564703 METTL12A8MUP2 240 aa16.19■□□□□ 0.18
RAB40C-208ENST00000564703 MEI4A8MW99 385 aa16.19■□□□□ 0.18
RAB40C-208ENST00000564703 UGT2B4P06133 528 aa16.19■□□□□ 0.18
RAB40C-208ENST00000564703 RETP07949 1114 aa16.19■□□□□ 0.18
RAB40C-208ENST00000564703 CES1P23141 567 aa16.19■□□□□ 0.18
RAB40C-208ENST00000564703 GKP32189 559 aa16.19■□□□□ 0.18
RAB40C-208ENST00000564703 DPP6P42658 865 aa16.19■□□□□ 0.18
RAB40C-208ENST00000564703 CREB5Q02930 508 aa16.19■□□□□ 0.18
RAB40C-208ENST00000564703 BCL2L1Q07817 233 aa16.19■□□□□ 0.18
RAB40C-208ENST00000564703 PPIDQ08752 370 aaKnown RBP16.19■□□□□ 0.18
RAB40C-208ENST00000564703 CNTN1Q12860 1018 aa16.19■□□□□ 0.18
RAB40C-208ENST00000564703 MEI1Q5TIA1 1274 aa16.19■□□□□ 0.18
RAB40C-208ENST00000564703 LYSMD4Q5XG99 296 aa16.19■□□□□ 0.18
RAB40C-208ENST00000564703 BBS12Q6ZW61 710 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms