RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 FADS3Q9Y5Q0 445 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 DOCK9Q9BZ29 2069 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 TRPM6Q9BX84 2022 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 ZFYVE26Q68DK2 2539 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 CACNA1GO43497 2377 aa12.4□□□□□ -0.43
GTF3C1-204ENST00000564664 WASH4PA8MWX3 477 aa12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 TOR1BO14657 336 aa12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 PRLRP16471 622 aa12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 FERP16591 822 aa12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 ACVRL1P37023 503 aa12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 RABIFP47224 123 aa12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 DUSP3P51452 185 aaPredicted RBP12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 SUOXP51687 545 aa12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 HNRNPKP61978 463 aaKnown RBP eCLIP12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 DNAJC3Q13217 504 aa12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 EFHC2Q5JST6 749 aa12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 KYAT3Q6YP21 454 aaKnown RBP12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 Q6ZSR6 202 aa12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 SLC25A45Q8N413 288 aa12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 RTL3Q8N8U3 475 aaKnown RBP12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 FAM181AQ8N9Y4 354 aa12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 OR2AP1Q8NGE2 309 aa12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 JOSD2Q8TAC2 188 aa12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 NXPE2Q96DL1 559 aa12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 BMFQ96LC9 184 aa12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 C1QTNF2Q9BXJ5 285 aa12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 NAT10Q9H0A0 1025 aaKnown RBP12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 CATSPERBQ9H7T0 1116 aa12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 NCKIPSDQ9NZQ3 722 aa12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 DNAI1Q9UI46 699 aa12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 FCF1Q9Y324 198 aaKnown RBP12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 MFHAS1Q9Y4C4 1052 aa12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 CSNK1G3Q9Y6M4 447 aa12.39□□□□□ -0.43
GTF3C1-204ENST00000564664 TP53BP1Q12888 1972 aaPredicted RBP12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 CHD5Q8TDI0 1954 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 A0A087WV48 116 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 FAM149AA5PLN7 773 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 C16orf96A6NNT2 1141 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 EIF3CLB5ME19 914 aaKnown RBP12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 FAM72CH0Y354 149 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 FPGTO14772 594 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 SCAMP1O15126 338 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 SIGLEC6O43699 453 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 PIAS2O75928 621 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 MBD3O95983 291 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 PAK4O96013 591 aaPredicted RBP12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 GP1BAP07359 652 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 CKMT1AP12532 417 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 GRM3Q14832 879 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 RTP5Q14D33 572 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 PARP15Q460N3 678 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 FAM72AQ5TYM5 149 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 SEL1L3Q68CR1 1132 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 ACAD10Q6JQN1 1059 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 FAM72DQ6L9T8 149 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 DNAJC24Q6P3W2 148 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 GCNT7Q6ZNI0 430 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 MON1BQ7L1V2 547 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 PHLDB2Q86SQ0 1253 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 FAM72BQ86X60 149 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 RYBPQ8N488 228 aaPredicted RBP12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 CCDC185Q8N715 623 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 DENND6BQ8NEG7 585 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 OR13H1Q8NG92 308 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 KLK6Q92876 244 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 EIF3CQ99613 913 aaKnown RBP12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 EPAS1Q99814 870 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 CNPY3Q9BT09 278 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 C1QTNF7Q9BXJ2 289 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 CALN1Q9BXU9 219 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 ZDHHC6Q9H6R6 413 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 GPR27Q9NS67 375 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 NDFIP2Q9NV92 336 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 NLGN3Q9NZ94 848 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 DKK3Q9UBP4 350 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 CA5BQ9Y2D0 317 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 RAXQ9Y2V3 346 aa12.38□□□□□ -0.43
GTF3C1-204ENST00000564664 SPTY2D1-AS1A0A0U1RR47 76 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 TCRBV5S1A1TA0A578 114 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 H3BM21 787 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 RNF103O00237 685 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 KRIT1O00522 736 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 TRIM38O00635 465 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 NEMP1O14524 444 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 FGF10O15520 208 aaPredicted RBP12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 BUB1O43683 1085 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 CSF2P04141 144 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 EPHB2P29323 1055 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 TARDBPQ13148 414 aaKnown RBP eCLIP12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 PTK2BQ14289 1009 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 RAB6CQ53S08 254 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 PPP1R15BQ5SWA1 713 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 CCDC183Q5T5S1 534 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 HES3Q5TGS1 186 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 SCYL2Q6P3W7 929 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 DCUN1D2Q6PH85 259 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 PARS2Q7L3T8 475 aaKnown RBP12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 TTC7BQ86TV6 843 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 UMODL1-AS1Q8N2C9 162 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 DCBLD1Q8N8Z6 715 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms