RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 PIK3AP1Q6ZUJ8 805 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 MRPL10Q7Z7H8 261 aaKnown RBP5.05□□□□□ -1.6
SMG1-206ENST00000562668 TLK2Q86UE8 772 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 ZBTB34Q8NCN2 500 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 MAML1Q92585 1016 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 KAT2BQ92831 832 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 GJA10Q969M2 543 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 PPP2R3CQ969Q6 453 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 COQ8BQ96D53 544 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 MTMR9Q96QG7 549 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 PCYT2Q99447 389 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 ZNF518BQ9C0D4 1074 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 FOXP1Q9H334 677 aaPredicted RBP5.05□□□□□ -1.6
SMG1-206ENST00000562668 SMC3Q9UQE7 1217 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 DRG1Q9Y295 367 aaKnown RBP5.05□□□□□ -1.6
SMG1-206ENST00000562668 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.05□□□□□ -1.6
SMG1-206ENST00000562668 CDY1Q9Y6F8 540 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 TNRC18O15417 2968 aaPredicted RBP5.05□□□□□ -1.6
SMG1-206ENST00000562668 SIP14410 1827 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 KIAA0100Q14667 2235 aaKnown RBP5.04□□□□□ -1.6
SMG1-206ENST00000562668 MKI67P46013 3256 aaKnown RBP5.04□□□□□ -1.6
SMG1-206ENST00000562668 HAS3O00219 553 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 AKAP10O43572 662 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 SRGAP2O75044 1071 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 PMPCBO75439 489 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 PSMD10O75832 226 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 RNF8O76064 485 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 STBD1O95210 358 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 GGPS1O95749 300 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 GH1P01241 217 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 FGBP02675 491 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 ASGR1P07306 291 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 MMP3P08254 477 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 XBP1P17861 261 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 HOXC8P31273 242 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 CDK7P50613 346 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 ACLYP53396 1101 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 LMAN2Q12907 356 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 DENND2CQ68D51 928 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 METTL7BQ6UX53 244 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 PTCHD4Q6ZW05 846 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 PLA2G4DQ86XP0 818 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 HSCBQ8IWL3 235 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 NRACQ8N912 160 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 FAM184AQ8NB25 1140 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 OR6J1Q8NGC5 347 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 C16orf52Q8NHV5 167 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 PPTC7Q8NI37 304 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 SLC35G2Q8TBE7 412 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 DNAJB14Q8TBM8 379 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 ZNF398Q8TD17 642 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 AFG1LQ8WV93 481 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 CTAGE1Q96RT6 745 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 MPHOSPH6Q99547 160 aaKnown RBP5.04□□□□□ -1.6
SMG1-206ENST00000562668 C16orf70Q9BSU1 422 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 B3GNT5Q9BYG0 378 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 TMEM60Q9H2L4 133 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 ATP6V0A4Q9HBG4 840 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 SNX15Q9NRS6 342 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 ARID2Q68CP9 1835 aa5.04□□□□□ -1.6
SMG1-206ENST00000562668 CCDC194A0A1B0GVG4 234 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 MBD3L4A6NDZ8 208 aaPredicted RBP5.03□□□□□ -1.6
SMG1-206ENST00000562668 MBD3L3A6NE82 208 aaPredicted RBP5.03□□□□□ -1.6
SMG1-206ENST00000562668 IPO5O00410 1097 aaKnown RBP5.03□□□□□ -1.6
SMG1-206ENST00000562668 ADAM10O14672 748 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 TBX3O15119 743 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 STX6O43752 255 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 TFRCP02786 760 aaKnown RBP5.03□□□□□ -1.6
SMG1-206ENST00000562668 EPHA3P29320 983 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 SLC7A1P30825 629 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 TRAPPC10P48553 1259 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 SETQ01105 290 aaPredicted RBP5.03□□□□□ -1.6
SMG1-206ENST00000562668 TRIM29Q14134 588 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 NEDD9Q14511 834 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 LARS2Q15031 903 aaKnown RBP5.03□□□□□ -1.6
SMG1-206ENST00000562668 IL17AQ16552 155 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 LETM2Q2VYF4 491 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 C4orf46Q504U0 113 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 CACHD1Q5VU97 1274 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 FAM173BQ6P4H8 233 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 CXCL17Q6UXB2 119 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 ZNF517Q6ZMY9 492 aaPredicted RBP5.03□□□□□ -1.6
SMG1-206ENST00000562668 EPM2AIP1Q7L775 607 aaPredicted RBP5.03□□□□□ -1.6
SMG1-206ENST00000562668 OVCH2Q7RTZ1 564 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 TPH2Q8IWU9 490 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 LINC01465Q8N7H1 131 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 OR56A3Q8NH54 315 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.03□□□□□ -1.6
SMG1-206ENST00000562668 OSR1Q8TAX0 266 aaPredicted RBP5.03□□□□□ -1.6
SMG1-206ENST00000562668 CDHR1Q96JP9 859 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 PPP1R9BQ96SB3 815 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 RIT2Q99578 217 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 VN1R3Q9BXE9 311 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 CDH19Q9H159 772 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 UNC45AQ9H3U1 944 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 C11orf49Q9H6J7 331 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 DDX25Q9UHL0 483 aaKnown RBP5.03□□□□□ -1.6
SMG1-206ENST00000562668 TANC1Q9C0D5 1861 aa5.03□□□□□ -1.6
SMG1-206ENST00000562668 ELP1O95163 1332 aa5.02□□□□□ -1.61
SMG1-206ENST00000562668 EMSYQ7Z589 1322 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms