RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 CTSBP07858 339 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 RALAP11233 206 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 PRLRP16471 622 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 NR1D1P20393 614 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 CD82P27701 267 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 AKT2P31751 481 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 ABCD1P33897 745 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 SLC12A3P55017 1021 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 MAP3K7CLP57077 242 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 TNNC1P63316 161 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 GTF2BQ00403 316 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 EFEMP1Q12805 493 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 ORC2Q13416 577 aaPredicted RBP5.48□□□□□ -1.53
HERC1-213ENST00000561359 DHX8Q14562 1220 aaKnown RBP5.48□□□□□ -1.53
HERC1-213ENST00000561359 ZXDCQ2QGD7 858 aaPredicted RBP5.48□□□□□ -1.53
HERC1-213ENST00000561359 DEFB109BQ30KR1 87 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 MPPE1Q53F39 396 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 ARSHQ5FYA8 562 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 RPS26P11Q5JNZ5 115 aaPredicted RBP5.48□□□□□ -1.53
HERC1-213ENST00000561359 TTC38Q5R3I4 469 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 C9orf64Q5T6V5 341 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 NUGGCQ68CJ6 796 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 TMPRSS9Q7Z410 1059 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 PTAR1Q7Z6K3 402 aaPredicted RBP5.48□□□□□ -1.53
HERC1-213ENST00000561359 TRIM69Q86WT6 500 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 STK40Q8N2I9 435 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 CPXM2Q8N436 756 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 IGSF22Q8N9C0 903 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 TMEM145Q8NBT3 493 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 C2CD4AQ8NCU7 369 aaPredicted RBP5.48□□□□□ -1.53
HERC1-213ENST00000561359 ZSWIM2Q8NEG5 633 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 LMX1AQ8TE12 382 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 APOBEC4Q8WW27 367 aaKnown RBP5.48□□□□□ -1.53
HERC1-213ENST00000561359 KLK6Q92876 244 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 JAKMIP2Q96AA8 810 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 TMA16Q96EY4 203 aaKnown RBP5.48□□□□□ -1.53
HERC1-213ENST00000561359 CDK5RAP3Q96JB5 506 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 TMEM74Q96NL1 305 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 CGRRF1Q99675 332 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 REEP2Q9BRK0 252 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 TRIM56Q9BRZ2 755 aaKnown RBP5.48□□□□□ -1.53
HERC1-213ENST00000561359 OSBPL1AQ9BXW6 950 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 IKZF4Q9H2S9 585 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 NMUR1Q9HB89 426 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 FZD3Q9NPG1 666 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 GGT7Q9UJ14 662 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 ODF2LQ9ULJ1 636 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 PHTF1Q9UMS5 762 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 SCML2Q9UQR0 700 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 CSNK1G3Q9Y6M4 447 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 TACC2O95359 2948 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 EDDM13A0A1B0GTR0 161 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 TARSL2A2RTX5 802 aaKnown RBP5.47□□□□□ -1.53
HERC1-213ENST00000561359 TTC34A8MYJ7 566 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 NKX2-8O15522 239 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 PLRG1O43660 514 aaKnown RBP5.47□□□□□ -1.53
HERC1-213ENST00000561359 TBCAO75347 108 aaKnown RBP5.47□□□□□ -1.53
HERC1-213ENST00000561359 CDC45O75419 566 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 BEST1O76090 585 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 CLSTN1O94985 981 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 CTDNEP1O95476 244 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 ECEL1O95672 775 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 LDLRP01130 860 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 FDPSP14324 419 aaKnown RBP5.47□□□□□ -1.53
HERC1-213ENST00000561359 LIFP15018 202 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 CCKBRP32239 447 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 CD70P32970 193 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 DRD3P35462 400 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 DDIT3P35638 169 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 ETV5P41161 510 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 CLDN2P57739 230 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 CCL7P80098 99 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 BMT2Q1RMZ1 405 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 WDR72Q3MJ13 1102 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 DIEXFQ68CQ4 756 aaKnown RBP5.47□□□□□ -1.53
HERC1-213ENST00000561359 OR6B2Q6IFH4 312 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 Q6ZSR6 202 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 PAQR9Q6ZVX9 377 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 ASB18Q6ZVZ8 466 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 GPRIN1Q7Z2K8 1008 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 KIAA0907Q7Z7F0 614 aaPredicted RBP5.47□□□□□ -1.53
HERC1-213ENST00000561359 GPBP1Q86WP2 473 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 MCEMP1Q8IX19 187 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 TP53INP2Q8IXH6 220 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 SLC35F3Q8IY50 421 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 MMP21Q8N119 569 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 SDR16C5Q8N3Y7 309 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 ZNF276Q8N554 614 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.47□□□□□ -1.53
HERC1-213ENST00000561359 ZMIZ2Q8NF64 920 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 OR5B17Q8NGF7 314 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 GPBAR1Q8TDU6 330 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 NKD1Q969G9 470 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 TNIP3Q96KP6 325 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 NOX5Q96PH1 765 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 CDK5RAP1Q96SZ6 601 aaKnown RBP5.47□□□□□ -1.53
HERC1-213ENST00000561359 CMKLR1Q99788 373 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 SMOQ99835 787 aa5.47□□□□□ -1.53
HERC1-213ENST00000561359 MMTAG2Q9BU76 263 aaKnown RBP5.47□□□□□ -1.53
HERC1-213ENST00000561359 CPEB1Q9BZB8 566 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms