RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 GMCL1P1Q8NEA9 526 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 MNS1Q8NEH6 495 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 FLAD1Q8NFF5 587 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 SUN3Q8TAQ9 357 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 SLC13A3Q8WWT9 602 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 RAB40AQ8WXH6 277 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 MYLIPQ8WY64 445 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 CASP10Q92851 521 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 NKD2Q969F2 451 aaPredicted RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 MCRS1Q96EZ8 462 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 BSCL2Q96G97 398 aaPredicted RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 PDLIM5Q96HC4 596 aaKnown RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 INTS4Q96HW7 963 aaKnown RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 LRIG1Q96JA1 1093 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 NSMCE2Q96MF7 247 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 TMEM68Q96MH6 324 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 KLHL32Q96NJ5 620 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 BBS4Q96RK4 519 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 KCNK16Q96T55 309 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 PNKPQ96T60 521 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 GPR20Q99678 358 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 HNRNPABQ99729 332 aaKnown RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 PAIP2Q9BPZ3 127 aaKnown RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 SRSF8Q9BRL6 282 aaKnown RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 PAAF1Q9BRP4 392 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 THUMPD2Q9BTF0 503 aaKnown RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 G6PC3Q9BUM1 346 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 TUBB2BQ9BVA1 445 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 CINPQ9BW66 212 aaPredicted RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 VN1R3Q9BXE9 311 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 HEMGNQ9BXL5 484 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 FAM129AQ9BZQ8 928 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 XYLT2Q9H1B5 865 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 VPS33BQ9H267 617 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 SLC6A15Q9H2J7 730 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 CLSTN2Q9H4D0 955 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 NCOR1P1Q9H4R4 102 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 L2HGDHQ9H9P8 463 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 KIF9Q9HAQ2 790 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 MAGEE1Q9HCI5 957 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 RANGRFQ9HD47 186 aaPredicted RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 TNFRSF12AQ9NP84 129 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 SLC35D1Q9NTN3 355 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 C20orf141Q9NUB4 165 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 INTS13Q9NVM9 706 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 PAG1Q9NWQ8 432 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 ERAP1Q9NZ08 941 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 AIPL1Q9NZN9 384 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 TMOD2Q9NZR1 351 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 RNF181Q9P0P0 153 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 HMG20BQ9P0W2 317 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 KIAA1456Q9P272 454 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 EXTL2Q9UBQ6 330 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 KLQ9UEF7 1012 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 ATP6V1HQ9UI12 483 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 CD207Q9UJ71 328 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 LAMP5Q9UJQ1 280 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 VAV3Q9UKW4 847 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 CDH7Q9ULB5 785 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 CCPG1Q9ULG6 757 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 NDRG4Q9ULP0 352 aaKnown RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 A4GNTQ9UNA3 340 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 SNX7Q9UNH6 387 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 ADAMTS8Q9UP79 889 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 PLAGL2Q9UPG8 496 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 RPH3AQ9Y2J0 694 aaPredicted RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 STRAPQ9Y3F4 350 aaKnown RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 ADAM18Q9Y3Q7 739 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 CAPN7Q9Y6W3 813 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 MAU2Q9Y6X3 613 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 NPHP3Q7Z494 1330 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 ARPC4-TTLL3A0A0A6YYG9 625 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 A0A0G2JPF8 293 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 C13orf42A0A1B0GVH6 325 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 A0A1W2PRX2 142 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 TYW5A2RUC4 315 aaKnown RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 SMIM30A4D0T7 59 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 OR14I1A6ND48 311 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 LRRIQ4A6NIV6 560 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 FAM90A7PA6NKC0 464 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 ENO4A6NNW6 628 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 TBKBP1A7MCY6 615 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 FAM90A22PA8MWA6 464 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 FAM90A12PA8MX19 464 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 GRXCR1A8MXD5 290 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 FAM90A23PA8MXZ1 464 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 A8MZ25 164 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 HNRNPCL3B7ZW38 293 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 M0QYT0 321 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 QSOX1O00391 747 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 FFAR3O14843 346 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 CTAGE5O15320 804 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 TEX28O15482 410 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 GPR42O15529 346 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 LIASO43766 372 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 KIF1CO43896 1103 aaKnown RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 PSPNO60542 156 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 PAGE4O60829 102 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 ATP6V1G1O75348 118 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 SEC31AO94979 1220 aaKnown RBP2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms