RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 SNX11Q9Y5W9 270 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 ACTL7AQ9Y615 435 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 ANKRD36A6QL64 1941 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 TBC1D3DA0A087WVF3 549 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 TBC1D3IA0A087WXS9 549 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 TBC1D3EA0A087X179 549 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 TBC1D3KA0A087X1G2 549 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 TBC1D3FA6NER0 549 aaPredicted RBP11.43□□□□□ -0.58
BMP4-204ENST00000558961 TBC1D3LB9A6J9 549 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 KPNA3O00505 521 aaPredicted RBP11.43□□□□□ -0.58
BMP4-204ENST00000558961 ZSCAN12O43309 604 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 AP1G1O43747 822 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 CREB3O43889 395 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 DFNA5O60443 496 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 CBFA2T3O75081 653 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 WNT1P04628 370 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 TBC1D3HP0C7X1 549 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 KCNA4P22459 653 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 CD38P28907 300 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 MIPP30301 263 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 NDST2P52849 883 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 TPI1P60174 286 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 CCDC15Q0P6D6 951 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 SERINC3Q13530 473 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 CA9Q16790 459 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 POM121L1PQ3SYA9 428 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 INO80DQ53TQ3 878 aaPredicted RBP11.43□□□□□ -0.58
BMP4-204ENST00000558961 ARSIQ5FYB1 569 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 KCNT1Q5JUK3 1230 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 AFMIDQ63HM1 303 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 TBC1D3GQ6DHY5 549 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 TBC1D3CQ6IPX1 549 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 ERN2Q76MJ5 926 aaKnown RBP11.43□□□□□ -0.58
BMP4-204ENST00000558961 GLRX5Q86SX6 157 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 IQCHQ86VS3 1027 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 TBC1D3Q8IZP1 549 aaPredicted RBP11.43□□□□□ -0.58
BMP4-204ENST00000558961 HMCESQ96FZ2 354 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 KLC2Q9H0B6 622 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 THAP2Q9H0W7 228 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 PDFQ9HBH1 243 aa11.43□□□□□ -0.58
BMP4-204ENST00000558961 TRPM6Q9BX84 2022 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 GOLGA6L9A6NEM1 432 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 RASA4BC9J798 803 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 WNT9AO14904 365 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 FLRT2O43155 660 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 RASA4O43374 803 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 SH3BP5O60239 455 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 PRPSAP2O60256 369 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 PCDHGA12O60330 932 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 TMCC1O94876 653 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 CYP1A2P05177 515 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 CCDC175P0C221 793 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 ADRB3P13945 408 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 CYLC1P35663 651 aaPredicted RBP11.42□□□□□ -0.58
BMP4-204ENST00000558961 HCAR3P49019 387 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 NEK3P51956 506 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 SNRPD1P62314 119 aaKnown RBP11.42□□□□□ -0.58
BMP4-204ENST00000558961 OVGP1Q12889 678 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 PIGHQ14442 188 aaPredicted RBP11.42□□□□□ -0.58
BMP4-204ENST00000558961 DPYSL2Q16555 572 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 TMEM259Q4ZIN3 620 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 SETMARQ53H47 684 aaPredicted RBP11.42□□□□□ -0.58
BMP4-204ENST00000558961 ALKBH5Q6P6C2 394 aaKnown RBP11.42□□□□□ -0.58
BMP4-204ENST00000558961 RFX8Q6ZV50 586 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 PARS2Q7L3T8 475 aaKnown RBP11.42□□□□□ -0.58
BMP4-204ENST00000558961 PRPF39Q86UA1 669 aaKnown RBP11.42□□□□□ -0.58
BMP4-204ENST00000558961 MFSD2AQ8NA29 543 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 TMEM145Q8NBT3 493 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 SKA1Q96BD8 255 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 SERAC1Q96JX3 654 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 CCDC42Q96M95 316 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 KCTD15Q96SI1 283 aaPredicted RBP11.42□□□□□ -0.58
BMP4-204ENST00000558961 DESI2Q9BSY9 194 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 OSBPL1AQ9BXW6 950 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 TM6SF2Q9BZW4 377 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 DHX35Q9H5Z1 703 aaKnown RBP11.42□□□□□ -0.58
BMP4-204ENST00000558961 DYRK4Q9NR20 520 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 GPATCH2LQ9NWQ4 482 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 MYO1AQ9UBC5 1043 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 ANGPTL2Q9UKU9 493 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 PCOLCE2Q9UKZ9 415 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 MFHAS1Q9Y4C4 1052 aa11.42□□□□□ -0.58
BMP4-204ENST00000558961 A0A0U1RQJ8 604 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 A0A1B0GTQ1 180 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 PRAMEF26H0Y7S4 382 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 H0Y8X5 98 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 EEF2KO00418 725 aaKnown RBP11.41□□□□□ -0.58
BMP4-204ENST00000558961 PJA2O43164 708 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 BUB1O43683 1085 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 RNGTTO60942 597 aaKnown RBP11.41□□□□□ -0.58
BMP4-204ENST00000558961 TUBB4AP04350 444 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 IL1R2P27930 398 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 CCT8P50990 548 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 C21orf59P57076 290 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 NXPH1P58417 271 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 FAM193AP78312 1265 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 SLC25A11Q02978 314 aaKnown RBP11.41□□□□□ -0.58
BMP4-204ENST00000558961 DPYSQ14117 519 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 SLC18A3Q16572 532 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 ZNF284Q2VY69 593 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms