RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 SCNM1Q9BWG6 230 aa1.75□□□□□ -2.13
USP3-209ENST00000558925 CADM1Q9BY67 442 aaKnown RBP1.75□□□□□ -2.13
USP3-209ENST00000558925 TKTL2Q9H0I9 626 aa1.75□□□□□ -2.13
USP3-209ENST00000558925 PDCL3Q9H2J4 239 aa1.75□□□□□ -2.13
USP3-209ENST00000558925 AAMDCQ9H7C9 122 aa1.75□□□□□ -2.13
USP3-209ENST00000558925 MOV10Q9HCE1 1003 aaKnown RBP1.75□□□□□ -2.13
USP3-209ENST00000558925 DIAPH3Q9NSV4 1193 aa1.75□□□□□ -2.13
USP3-209ENST00000558925 ATP8A2Q9NTI2 1148 aa1.75□□□□□ -2.13
USP3-209ENST00000558925 NSMCE4AQ9NXX6 385 aa1.75□□□□□ -2.13
USP3-209ENST00000558925 MPP6Q9NZW5 540 aa1.75□□□□□ -2.13
USP3-209ENST00000558925 KIAA1456Q9P272 454 aa1.75□□□□□ -2.13
USP3-209ENST00000558925 ZNF70Q9UC06 446 aaPredicted RBP1.75□□□□□ -2.13
USP3-209ENST00000558925 CDH22Q9UJ99 828 aa1.75□□□□□ -2.13
USP3-209ENST00000558925 TLK1Q9UKI8 766 aa1.75□□□□□ -2.13
USP3-209ENST00000558925 INTS6Q9UL03 887 aaKnown RBP1.75□□□□□ -2.13
USP3-209ENST00000558925 KCNE2Q9Y6J6 123 aa1.75□□□□□ -2.13
USP3-209ENST00000558925 OBSCNQ5VST9 7968 aa1.75□□□□□ -2.13
USP3-209ENST00000558925 RUSC2Q8N2Y8 1516 aa1.75□□□□□ -2.13
USP3-209ENST00000558925 SPATA31A5Q5VU36 1347 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 SPATA31A7Q8IWB4 1347 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP1.74□□□□□ -2.13
USP3-209ENST00000558925 LIPT2A6NK58 231 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 C2CD4BA6NLJ0 364 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 BTBD19C9JJ37 291 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 TMEM232C9JQI7 657 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 POC1B-GALNT4F8VUJ3 575 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 UBE2Q2LH0YL09 131 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 TCERG1O14776 1098 aaKnown RBP1.74□□□□□ -2.13
USP3-209ENST00000558925 VILLO15195 856 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 INPPL1O15357 1258 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 MSI1O43347 362 aaKnown RBP1.74□□□□□ -2.13
USP3-209ENST00000558925 NEURL1O76050 574 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 SEC14L2O76054 403 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 JTBO76095 146 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 OR2C1O95371 312 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 NFATC1O95644 943 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 STARD3NLO95772 234 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 PLAUP00749 431 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 IGLV2-14P01704 120 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 DNTTP04053 509 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 ADRB2P07550 413 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 CLTBP09497 229 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 IL7RP16871 459 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 POU1F1P28069 291 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 FMO4P31512 558 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 PPARGP37231 505 aaPredicted RBP1.74□□□□□ -2.13
USP3-209ENST00000558925 CYP2J2P51589 502 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 CLNS1AP54105 237 aaKnown RBP1.74□□□□□ -2.13
USP3-209ENST00000558925 RARSP54136 660 aaKnown RBP1.74□□□□□ -2.13
USP3-209ENST00000558925 CACNA2D1P54289 1103 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 OAZ1P54368 228 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 ARSFP54793 590 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 F2RL1P55085 397 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 NAP1L1P55209 391 aaKnown RBP1.74□□□□□ -2.13
USP3-209ENST00000558925 EIF3BP55884 814 aaKnown RBP1.74□□□□□ -2.13
USP3-209ENST00000558925 RPL7AP62424 266 aaKnown RBP1.74□□□□□ -2.13
USP3-209ENST00000558925 OLR1P78380 273 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 IFI35P80217 286 aaPredicted RBP1.74□□□□□ -2.13
USP3-209ENST00000558925 NHLH1Q02575 133 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 TFF2Q03403 129 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 TAP1Q03518 808 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 SLC18A2Q05940 514 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 GRIK3Q13003 919 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 ACVR2BQ13705 512 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 BECN1Q14457 450 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 IRF3Q14653 427 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 WTAPQ15007 396 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 RNPS1Q15287 305 aaKnown RBP1.74□□□□□ -2.13
USP3-209ENST00000558925 EDRF1Q3B7T1 1238 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 C5orf22Q49AR2 442 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 DUSP28Q4G0W2 176 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 SYTL3Q4VX76 610 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 CCDC184Q52MB2 194 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 RILPL1Q5EBL4 403 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 C10orf76Q5T2E6 689 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 SERTAD4-AS1Q5TG53 156 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 PRAMEF17Q5VTA0 474 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 KIAA0930Q6ICG6 404 aaPredicted RBP1.74□□□□□ -2.13
USP3-209ENST00000558925 AADACL2Q6P093 401 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 PDXDC1Q6P996 788 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 KLHL24Q6TFL4 600 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 TMCO3Q6UWJ1 677 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 ZNF782Q6ZMW2 699 aaPredicted RBP1.74□□□□□ -2.13
USP3-209ENST00000558925 PRSS45Q7RTY3 260 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 NOXA1Q86UR1 476 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 WDR5BQ86VZ2 330 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 DHX40Q8IX18 779 aaKnown RBP1.74□□□□□ -2.13
USP3-209ENST00000558925 KIAA2013Q8IYS2 634 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 FAM9BQ8IZU0 186 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 CMASQ8NFW8 434 aaPredicted RBP1.74□□□□□ -2.13
USP3-209ENST00000558925 RASSF8Q8NHQ8 419 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 FAR1Q8WVX9 515 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 MAP4K1Q92918 833 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 GTF3C6Q969F1 213 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 EME1Q96AY2 570 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 SARAFQ96BY9 339 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 ZBTB9Q96C00 473 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 NSUN4Q96CB9 384 aaKnown RBP1.74□□□□□ -2.13
USP3-209ENST00000558925 SAAL1Q96ER3 474 aa1.74□□□□□ -2.13
USP3-209ENST00000558925 P2RY11Q96G91 374 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms