RNA–Protein interactions for RNA: ENST00000558917.1

AC090888.3-201, humanhuman

BASIC

Gene AC090888.3, Length 509 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090888.3-201ENST00000558917 NME7Q9Y5B8 376 aa6.61□□□□□ -1.35
AC090888.3-201ENST00000558917 UNC13CQ8NB66 2214 aa6.61□□□□□ -1.35
AC090888.3-201ENST00000558917 PRRC2AP48634 2157 aaKnown RBP6.61□□□□□ -1.35
AC090888.3-201ENST00000558917 NTN3O00634 580 aaPredicted RBP6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 NPC1O15118 1278 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 LATO43561 262 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 CLEC3AO75596 197 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 TOM1L1O75674 476 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 PENKP01210 267 aaPredicted RBP6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 LIFP15018 202 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 ENDOUP21128 410 aaKnown RBP6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 CCR5P51681 352 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 PEX3P56589 373 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 MAPK7Q13164 816 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 PPP2R5AQ15172 486 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 SPATS1Q496A3 300 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 SP5Q6BEB4 398 aaPredicted RBP6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 SERPINA13PQ6UXR4 307 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 RAB11FIP2Q7L804 512 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 CATSPER3Q86XQ3 398 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 BLIDQ8IZY5 108 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 CCDC148Q8NFR7 591 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 MYLPFQ96A32 169 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 SKA1Q96BD8 255 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 DRC1Q96MC2 740 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 ACBD6Q9BR61 282 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 KRTAP17-1Q9BYP8 105 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 PABPC3Q9H361 631 aaKnown RBP6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 TMPRSS5Q9H3S3 457 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 BRMS1Q9HCU9 246 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 PRDM8Q9NQV8 689 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 ERVK13-1Q9NX77 482 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 DDX43Q9NXZ2 648 aaKnown RBP6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 WDR35Q9P2L0 1181 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 PISDQ9UG56 409 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 MXRA5Q9NR99 2828 aa6.6□□□□□ -1.35
AC090888.3-201ENST00000558917 EME2A4GXA9 379 aaPredicted RBP6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 CCDC169A6NNP5 214 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 F8VP50 259 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 SGSM2O43147 1006 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 CCNT1O60563 726 aaKnown RBP6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 TCEA3O75764 348 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 TBX18O95935 607 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 GSPT1P15170 499 aaKnown RBP6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 LMO2P25791 158 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 CHMLP26374 656 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 OAS2P29728 719 aaKnown RBP6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 LIMS1P48059 325 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 KCNC1P48547 511 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 HARS2P49590 506 aaKnown RBP6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 TAF6P49848 677 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 PSMC1P62191 440 aaKnown RBP6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 NOP14P78316 857 aaKnown RBP6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 POM121L1PQ3SYA9 428 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 ZNF542PQ5EBM4 170 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 ATP1A1-AS1Q5TC04 95 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 NAPEPLDQ6IQ20 393 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 RPTNQ6XPR3 784 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 PRIMA1Q86XR5 153 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 SPATA2LQ8IUW3 424 aaPredicted RBP6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 TEX19Q8NA77 164 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 OR2T34Q8NGX1 318 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 USP7Q93009 1102 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 NKD1Q969G9 470 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 FUBP3Q96I24 572 aaKnown RBP eCLIP6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 EPB41L5Q9HCM4 733 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 TNFRSF12AQ9NP84 129 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 KLHL11Q9NVR0 708 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 GFOD1Q9NXC2 390 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 FBXL12Q9NXK8 326 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 NLGN3Q9NZ94 848 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 SEPT10Q9P0V9 454 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 IMPACTQ9P2X3 320 aa6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 CHORDC1Q9UHD1 332 aaPredicted RBP6.59□□□□□ -1.35
AC090888.3-201ENST00000558917 A0A1W2PQ27 194 aa6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 A0A1W2PQ64 194 aa6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 A0A1W2PQC6 194 aa6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 KPNA7A9QM74 516 aa6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 GABRDO14764 452 aa6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 FFAR3O14843 346 aa6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 SCAMP1O15126 338 aa6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 MID1O15344 667 aa6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 SLC16A4O15374 487 aa6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 PRICKLE3O43900 615 aaPredicted RBP6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 SORBS2O94875 1100 aaKnown RBP6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 NADKO95544 446 aaPredicted RBP6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 KLKB1P03952 638 aa6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 C4BPAP04003 597 aaKnown RBP6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 DNTTP04053 509 aa6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 ZDHHC11BP0C7U3 371 aa6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 PRKAR1AP10644 381 aa6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 GARTP22102 1010 aa6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 METAP1P53582 386 aa6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 ADPRHP54922 357 aa6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 MYL7Q01449 175 aa6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 ZBTB16Q05516 673 aa6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 EFEMP1Q12805 493 aa6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 IFRD2Q12894 506 aaPredicted RBP6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 SMTNL2Q2TAL5 461 aa6.58□□□□□ -1.36
AC090888.3-201ENST00000558917 NUGGCQ68CJ6 796 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms