RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 DHX35Q9H5Z1 703 aaKnown RBP12.12□□□□□ -0.47
HERC1-202ENST00000558324 RETREG1Q9H6L5 497 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 CATSPERBQ9H7T0 1116 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 CAAP1Q9H8G2 361 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 MYO1AQ9UBC5 1043 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 CNOT8Q9UFF9 292 aaKnown RBP12.12□□□□□ -0.47
HERC1-202ENST00000558324 GGT7Q9UJ14 662 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 AP4E1Q9UPM8 1137 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 PCNX2A6NKB5 2137 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 ASPMQ8IZT6 3477 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 EPG5Q9HCE0 2579 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 FAM149AA5PLN7 773 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 TMEM8BA6NDV4 472 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 C16orf96A6NNT2 1141 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 DDX3XO00571 662 aaKnown RBP eCLIP12.11□□□□□ -0.47
HERC1-202ENST00000558324 ENC1O14682 589 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 YKT6O15498 198 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 LDOC1O95751 146 aaPredicted RBP12.11□□□□□ -0.47
HERC1-202ENST00000558324 GSRP00390 522 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 ABL2P42684 1182 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 AIF1P55008 147 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 RHOAP61586 193 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 TPM4P67936 248 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 OVGP1Q12889 678 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 DNAJC3Q13217 504 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 NR1I3Q14994 352 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 CA9Q16790 459 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 KLHL40Q2TBA0 621 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 TMEM259Q4ZIN3 620 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 TDRD12Q587J7 1177 aaKnown RBP12.11□□□□□ -0.47
HERC1-202ENST00000558324 PLEKHA7Q6IQ23 1121 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 DHRS13Q6UX07 377 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 PTAR1Q7Z6K3 402 aaPredicted RBP12.11□□□□□ -0.47
HERC1-202ENST00000558324 OXR1Q8N573 874 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 KDF1Q8NAX2 398 aaPredicted RBP12.11□□□□□ -0.47
HERC1-202ENST00000558324 OR13H1Q8NG92 308 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 CELF6Q96J87 481 aaKnown RBP12.11□□□□□ -0.47
HERC1-202ENST00000558324 VCPIP1Q96JH7 1222 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 GDAP1L1Q96MZ0 367 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 PEBP4Q96S96 227 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 SNRNP25Q9BV90 132 aaKnown RBP12.11□□□□□ -0.47
HERC1-202ENST00000558324 ERVMER34-1Q9H9K5 563 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 AIPL1Q9NZN9 384 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 FADS3Q9Y5Q0 445 aa12.11□□□□□ -0.47
HERC1-202ENST00000558324 CEP295Q9C0D2 2601 aa12.1□□□□□ -0.47
HERC1-202ENST00000558324 FAM221BA6H8Z2 402 aa12.1□□□□□ -0.47
HERC1-202ENST00000558324 TMEM191CA6NGB0 347 aa12.1□□□□□ -0.47
HERC1-202ENST00000558324 ZSCAN5CA6NGD5 496 aaPredicted RBP12.1□□□□□ -0.47
HERC1-202ENST00000558324 EEF2KO00418 725 aaKnown RBP12.1□□□□□ -0.47
HERC1-202ENST00000558324 RAD51BO15315 384 aa12.1□□□□□ -0.47
HERC1-202ENST00000558324 FGF10O15520 208 aaPredicted RBP12.1□□□□□ -0.47
HERC1-202ENST00000558324 PRPSAP2O60256 369 aa12.1□□□□□ -0.47
HERC1-202ENST00000558324 IGSF6O95976 241 aa12.1□□□□□ -0.47
HERC1-202ENST00000558324 PAK4O96013 591 aaPredicted RBP12.1□□□□□ -0.47
HERC1-202ENST00000558324 PRKCIP41743 596 aa12.1□□□□□ -0.47
HERC1-202ENST00000558324 RXRGP48443 463 aa12.1□□□□□ -0.47
HERC1-202ENST00000558324 CLDN6P56747 220 aa12.1□□□□□ -0.47
HERC1-202ENST00000558324 RPS21P63220 83 aaKnown RBP12.1□□□□□ -0.47
HERC1-202ENST00000558324 FANCCQ00597 558 aa12.1□□□□□ -0.47
HERC1-202ENST00000558324 FGL2Q14314 439 aa12.1□□□□□ -0.47
HERC1-202ENST00000558324 MYLK3Q32MK0 819 aa12.1□□□□□ -0.47
HERC1-202ENST00000558324 PARP15Q460N3 678 aa12.1□□□□□ -0.47
HERC1-202ENST00000558324 ZNF805Q5CZA5 627 aa12.1□□□□□ -0.47
HERC1-202ENST00000558324 PPP6R3Q5H9R7 873 aaPredicted RBP12.1□□□□□ -0.47
HERC1-202ENST00000558324 KIAA1161Q6NSJ0 714 aa12.1□□□□□ -0.47
HERC1-202ENST00000558324 CCNI2Q6ZMN8 369 aaPredicted RBP12.1□□□□□ -0.47
HERC1-202ENST00000558324 GCNT7Q6ZNI0 430 aa12.1□□□□□ -0.47
HERC1-202ENST00000558324 ARFGAP1Q8N6T3 406 aa12.1□□□□□ -0.47
HERC1-202ENST00000558324 CPLX3Q8WVH0 158 aa12.1□□□□□ -0.47
HERC1-202ENST00000558324 KLHL32Q96NJ5 620 aa12.1□□□□□ -0.47
HERC1-202ENST00000558324 SLC17A9Q9BYT1 436 aa12.1□□□□□ -0.47
HERC1-202ENST00000558324 KMT2BQ9UMN6 2715 aaPredicted RBP12.09□□□□□ -0.47
HERC1-202ENST00000558324 CXorf51AA0A1B0GTR3 108 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 IGLON5A6NGN9 336 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 A6NNZ2 444 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 WASH4PA8MWX3 477 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 INSIG1O15503 277 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 FFAR2O15552 330 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 SPINT1O43278 529 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 DAPK3O43293 454 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 RNF8O76064 485 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 DKK1O94907 266 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 POP4O95707 220 aaKnown RBP12.09□□□□□ -0.47
HERC1-202ENST00000558324 GZMAP12544 262 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 MIPP30301 263 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 YBEYP58557 167 aaPredicted RBP12.09□□□□□ -0.47
HERC1-202ENST00000558324 SERINC3Q13530 473 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 ZNF542PQ5EBM4 170 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 ERMARDQ5T6L9 678 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 GDPD4Q6W3E5 623 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 KDM7AQ6ZMT4 941 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 Q6ZSR6 202 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 TMPRSS7Q7RTY8 843 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 KANSL1Q7Z3B3 1105 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 PLPP6Q8IY26 295 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 SLC22A18ASQ8N1D0 253 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 UMODL1-AS1Q8N2C9 162 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 VOPP1Q96AW1 172 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 LRIG1Q96JA1 1093 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 FEM1CQ96JP0 617 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms