RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 RSPRY1Q96DX4 576 aa20.69■□□□□ 0.9
SNRPA1-205ENST00000558036 ZNF778Q96MU6 729 aa20.69■□□□□ 0.9
SNRPA1-205ENST00000558036 PSKH2Q96QS6 385 aa20.69■□□□□ 0.9
SNRPA1-205ENST00000558036 UGT1A7Q9HAW7 530 aa20.69■□□□□ 0.9
SNRPA1-205ENST00000558036 UGT1A10Q9HAW8 530 aa20.69■□□□□ 0.9
SNRPA1-205ENST00000558036 UGT1A8Q9HAW9 530 aa20.69■□□□□ 0.9
SNRPA1-205ENST00000558036 SEPT3Q9UH03 358 aa20.69■□□□□ 0.9
SNRPA1-205ENST00000558036 K7ERQ8 282 aa20.68■□□□□ 0.9
SNRPA1-205ENST00000558036 CYBBP04839 570 aa20.68■□□□□ 0.9
SNRPA1-205ENST00000558036 MSH2P43246 934 aa20.68■□□□□ 0.9
SNRPA1-205ENST00000558036 MPP7Q5T2T1 576 aa20.68■□□□□ 0.9
SNRPA1-205ENST00000558036 STEAP4Q687X5 459 aa20.68■□□□□ 0.9
SNRPA1-205ENST00000558036 DCAKDQ8WVC6 231 aa20.68■□□□□ 0.9
SNRPA1-205ENST00000558036 MFSD3Q96ES6 412 aa20.68■□□□□ 0.9
SNRPA1-205ENST00000558036 PPP1R2P1Q96PQ5 205 aa20.68■□□□□ 0.9
SNRPA1-205ENST00000558036 MGME1Q9BQP7 344 aa20.68■□□□□ 0.9
SNRPA1-205ENST00000558036 NOD2Q9HC29 1040 aa20.68■□□□□ 0.9
SNRPA1-205ENST00000558036 PSMC3IPQ9P2W1 217 aaPredicted RBP20.68■□□□□ 0.9
SNRPA1-205ENST00000558036 HELZP42694 1942 aaKnown RBP20.68■□□□□ 0.9
SNRPA1-205ENST00000558036 TMCC1O94876 653 aa20.68■□□□□ 0.9
SNRPA1-205ENST00000558036 SCNN1BP51168 640 aa20.68■□□□□ 0.9
SNRPA1-205ENST00000558036 USP4Q13107 963 aa20.68■□□□□ 0.9
SNRPA1-205ENST00000558036 TDRPQ86YL5 185 aa20.68■□□□□ 0.9
SNRPA1-205ENST00000558036 NPAS3Q8IXF0 933 aa20.68■□□□□ 0.9
SNRPA1-205ENST00000558036 ZNF669Q96BR6 464 aaPredicted RBP20.68■□□□□ 0.9
SNRPA1-205ENST00000558036 DHRS4Q9BTZ2 278 aa20.68■□□□□ 0.9
SNRPA1-205ENST00000558036 BBS2Q9BXC9 721 aa20.68■□□□□ 0.9
SNRPA1-205ENST00000558036 IL22Q9GZX6 179 aa20.68■□□□□ 0.9
SNRPA1-205ENST00000558036 SLC24A2Q9UI40 661 aa20.68■□□□□ 0.9
SNRPA1-205ENST00000558036 FCF1Q9Y324 198 aaKnown RBP20.68■□□□□ 0.9
SNRPA1-205ENST00000558036 POLBP06746 335 aa20.67■□□□□ 0.9
SNRPA1-205ENST00000558036 PRKCHP24723 683 aa20.67■□□□□ 0.9
SNRPA1-205ENST00000558036 NPY2RP49146 381 aa20.67■□□□□ 0.9
SNRPA1-205ENST00000558036 GET4Q7L5D6 327 aaPredicted RBP20.67■□□□□ 0.9
SNRPA1-205ENST00000558036 CCDC117Q8IWD4 279 aaPredicted RBP20.67■□□□□ 0.9
SNRPA1-205ENST00000558036 SRRM1Q8IYB3 904 aaKnown RBP20.67■□□□□ 0.9
SNRPA1-205ENST00000558036 BBS5Q8N3I7 341 aa20.67■□□□□ 0.9
SNRPA1-205ENST00000558036 FIBINQ8TAL6 211 aa20.67■□□□□ 0.9
SNRPA1-205ENST00000558036 IRF7Q92985 503 aa20.67■□□□□ 0.9
SNRPA1-205ENST00000558036 TADA1Q96BN2 335 aa20.67■□□□□ 0.9
SNRPA1-205ENST00000558036 STMN4Q9H169 189 aaPredicted RBP20.67■□□□□ 0.9
SNRPA1-205ENST00000558036 KIF9Q9HAQ2 790 aa20.67■□□□□ 0.9
SNRPA1-205ENST00000558036 VPS45Q9NRW7 570 aa20.67■□□□□ 0.9
SNRPA1-205ENST00000558036 ABCB8Q9NUT2 735 aa20.67■□□□□ 0.9
SNRPA1-205ENST00000558036 MOCS1Q9NZB8 636 aa20.67■□□□□ 0.9
SNRPA1-205ENST00000558036 INTS6Q9UL03 887 aaKnown RBP20.67■□□□□ 0.9
SNRPA1-205ENST00000558036 SOBPA7XYQ1 873 aa20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 HLA-FP30511 346 aa20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 PPP2R2AP63151 447 aa20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 LY6G5CQ5SRR4 150 aa20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 ASTLQ6HA08 431 aaPredicted RBP20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 KDM7AQ6ZMT4 941 aa20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 DCAF4L2Q8NA75 395 aa20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 MDM1Q8TC05 714 aa20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 FGF13Q92913 245 aa20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 CDCA3Q99618 268 aaPredicted RBP20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 ERVK-10P10266 1014 aa20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 KRT15P19012 456 aa20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 FSHRP23945 695 aa20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 NMBRP28336 390 aa20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 RFTN1Q14699 578 aaPredicted RBP20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 FAM78AQ5JUQ0 283 aa20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 TRIM68Q6AZZ1 485 aa20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 ADGRD1Q6QNK2 874 aa20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 TMEM135Q86UB9 458 aa20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 LRRC6Q86X45 466 aa20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 ADGRG2Q8IZP9 1017 aa20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 RIBC1Q8N443 379 aaPredicted RBP20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 SLC44A1Q8WWI5 657 aa20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 PPP2R3CQ969Q6 453 aa20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 SELENOSQ9BQE4 189 aa20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 NAT9Q9BTE0 207 aa20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 SPHK2Q9NRA0 654 aa20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 KIAA1522Q9P206 1035 aaPredicted RBP20.66■□□□□ 0.9
SNRPA1-205ENST00000558036 PRUNE2Q8WUY3 3088 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 FAM159BA6NKW6 160 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 SMAD6O43541 496 aaKnown RBP20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 GSTA2P09210 222 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 TYRP14679 529 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 BMP8BP34820 402 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 RNF43Q68DV7 783 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 ALG1LQ6GMV1 187 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 SYCE2Q6PIF2 218 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 CCNJLQ8IV13 435 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 NAT16Q8N8M0 369 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 ATP2A3Q93084 1043 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 C2orf49Q9BVC5 232 aaPredicted RBP20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 NSUN3Q9H649 340 aaKnown RBP20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 DZANK1Q9NVP4 752 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 FETUBQ9UGM5 382 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 IKBKGQ9Y6K9 419 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 PRRC2BQ5JSZ5 2229 aaKnown RBP20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 ZCWPW2A0A1B0GU75 182 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 A0A1W2PPM1 405 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 TRIM24O15164 1050 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 ALDH1A2O94788 518 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 PENKP01210 267 aaPredicted RBP20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 INHBAP08476 426 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 F7P08709 466 aaPredicted RBP20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 GALNT3Q14435 633 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms