RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 IL1BP01584 269 aa21.57■■□□□ 1.04
CASC4-204ENST00000557945 HLA-DQB2P05538 268 aa21.57■■□□□ 1.04
CASC4-204ENST00000557945 GABRG2P18507 467 aa21.57■■□□□ 1.04
CASC4-204ENST00000557945 PTPN3P26045 913 aa21.57■■□□□ 1.04
CASC4-204ENST00000557945 PXNP49023 591 aaPredicted RBP21.57■■□□□ 1.04
CASC4-204ENST00000557945 SCNN1BP51168 640 aa21.57■■□□□ 1.04
CASC4-204ENST00000557945 COPAP53621 1224 aa21.57■■□□□ 1.04
CASC4-204ENST00000557945 CSTF1Q05048 431 aaKnown RBP21.57■■□□□ 1.04
CASC4-204ENST00000557945 RAD51Q06609 339 aa21.57■■□□□ 1.04
CASC4-204ENST00000557945 BYSLQ13895 437 aaKnown RBP21.57■■□□□ 1.04
CASC4-204ENST00000557945 CCNG2Q16589 344 aa21.57■■□□□ 1.04
CASC4-204ENST00000557945 ZNF776Q68DI1 518 aaPredicted RBP21.57■■□□□ 1.04
CASC4-204ENST00000557945 SRLQ86TD4 932 aa21.57■■□□□ 1.04
CASC4-204ENST00000557945 CAMKK1Q8N5S9 505 aa21.57■■□□□ 1.04
CASC4-204ENST00000557945 ZNF419Q96HQ0 510 aaPredicted RBP21.57■■□□□ 1.04
CASC4-204ENST00000557945 MGME1Q9BQP7 344 aa21.57■■□□□ 1.04
CASC4-204ENST00000557945 TMEM121Q9BTD3 319 aa21.57■■□□□ 1.04
CASC4-204ENST00000557945 MKRN2Q9H000 416 aaKnown RBP21.57■■□□□ 1.04
CASC4-204ENST00000557945 RSPH9Q9H1X1 276 aaPredicted RBP21.57■■□□□ 1.04
CASC4-204ENST00000557945 PRMT8Q9NR22 394 aaPredicted RBP21.57■■□□□ 1.04
CASC4-204ENST00000557945 HOMER3Q9NSC5 361 aa21.57■■□□□ 1.04
CASC4-204ENST00000557945 IL36AQ9UHA7 158 aa21.57■■□□□ 1.04
CASC4-204ENST00000557945 ZNF148Q9UQR1 794 aa21.57■■□□□ 1.04
CASC4-204ENST00000557945 CKAP5Q14008 2032 aa21.57■■□□□ 1.04
CASC4-204ENST00000557945 GOLGA6L10A0A0M3HER8 536 aa21.56■■□□□ 1.04
CASC4-204ENST00000557945 TTC24A2A3L6 582 aaPredicted RBP21.56■■□□□ 1.04
CASC4-204ENST00000557945 K7ESF4 209 aa21.56■■□□□ 1.04
CASC4-204ENST00000557945 ALOX15BO15296 676 aa21.56■■□□□ 1.04
CASC4-204ENST00000557945 INSIG1O15503 277 aa21.56■■□□□ 1.04
CASC4-204ENST00000557945 STK10O94804 968 aaKnown RBP21.56■■□□□ 1.04
CASC4-204ENST00000557945 NDUFV2P19404 249 aa21.56■■□□□ 1.04
CASC4-204ENST00000557945 GKP32189 559 aa21.56■■□□□ 1.04
CASC4-204ENST00000557945 PAFAH1B1P43034 410 aa21.56■■□□□ 1.04
CASC4-204ENST00000557945 PSMD8P48556 350 aa21.56■■□□□ 1.04
CASC4-204ENST00000557945 RPS14P62263 151 aaKnown RBP21.56■■□□□ 1.04
CASC4-204ENST00000557945 NSUN2Q08J23 767 aaKnown RBP eCLIP21.56■■□□□ 1.04
CASC4-204ENST00000557945 WASHC5Q12768 1159 aa21.56■■□□□ 1.04
CASC4-204ENST00000557945 TEX44Q53QW1 395 aa21.56■■□□□ 1.04
CASC4-204ENST00000557945 ARSIQ5FYB1 569 aa21.56■■□□□ 1.04
CASC4-204ENST00000557945 CREG2Q8IUH2 290 aa21.56■■□□□ 1.04
CASC4-204ENST00000557945 PRELID2Q8N945 189 aa21.56■■□□□ 1.04
CASC4-204ENST00000557945 PRCCQ92733 491 aaPredicted RBP21.56■■□□□ 1.04
CASC4-204ENST00000557945 NKD2Q969F2 451 aaPredicted RBP21.56■■□□□ 1.04
CASC4-204ENST00000557945 SIPA1Q96FS4 1042 aa21.56■■□□□ 1.04
CASC4-204ENST00000557945 MRGPRX1Q96LB2 322 aa21.56■■□□□ 1.04
CASC4-204ENST00000557945 POLR1EQ9GZS1 481 aaKnown RBP21.56■■□□□ 1.04
CASC4-204ENST00000557945 SCUBE2Q9NQ36 999 aa21.56■■□□□ 1.04
CASC4-204ENST00000557945 KLHL8Q9P2G9 620 aaPredicted RBP21.56■■□□□ 1.04
CASC4-204ENST00000557945 AMACRQ9UHK6 382 aa21.56■■□□□ 1.04
CASC4-204ENST00000557945 GJB3O75712 270 aa21.55■■□□□ 1.04
CASC4-204ENST00000557945 ZNF189O75820 626 aaPredicted RBP21.55■■□□□ 1.04
CASC4-204ENST00000557945 PRNPP04156 253 aa21.55■■□□□ 1.04
CASC4-204ENST00000557945 CSNK1DP48730 415 aa21.55■■□□□ 1.04
CASC4-204ENST00000557945 CNTD1Q8N815 330 aa21.55■■□□□ 1.04
CASC4-204ENST00000557945 FAM71DQ8N9W8 422 aa21.55■■□□□ 1.04
CASC4-204ENST00000557945 MDGA1Q8NFP4 955 aa21.55■■□□□ 1.04
CASC4-204ENST00000557945 PIP4K2CQ8TBX8 421 aa21.55■■□□□ 1.04
CASC4-204ENST00000557945 VAT1Q99536 393 aa21.55■■□□□ 1.04
CASC4-204ENST00000557945 SEMA3CQ99985 751 aa21.55■■□□□ 1.04
CASC4-204ENST00000557945 PPM1HQ9ULR3 514 aa21.55■■□□□ 1.04
CASC4-204ENST00000557945 ATP8A1Q9Y2Q0 1164 aa21.55■■□□□ 1.04
CASC4-204ENST00000557945 WASF2Q9Y6W5 498 aa21.55■■□□□ 1.04
CASC4-204ENST00000557945 CACNA1IQ9P0X4 2223 aa21.55■■□□□ 1.04
CASC4-204ENST00000557945 CFAP69A5D8W1 941 aa21.54■■□□□ 1.04
CASC4-204ENST00000557945 C1QTNF3-AMACRE9PGA6 284 aa21.54■■□□□ 1.04
CASC4-204ENST00000557945 KPNA3O00505 521 aaPredicted RBP21.54■■□□□ 1.04
CASC4-204ENST00000557945 LEFTY1O75610 366 aa21.54■■□□□ 1.04
CASC4-204ENST00000557945 URI1O94763 535 aaPredicted RBP21.54■■□□□ 1.04
CASC4-204ENST00000557945 CTSLP07711 333 aa21.54■■□□□ 1.04
CASC4-204ENST00000557945 ACADMP11310 421 aa21.54■■□□□ 1.04
CASC4-204ENST00000557945 MAPK8P45983 427 aa21.54■■□□□ 1.04
CASC4-204ENST00000557945 OASLQ15646 514 aaKnown RBP21.54■■□□□ 1.04
CASC4-204ENST00000557945 CST6Q15828 149 aa21.54■■□□□ 1.04
CASC4-204ENST00000557945 POM121L1PQ3SYA9 428 aa21.54■■□□□ 1.04
CASC4-204ENST00000557945 FAM46CQ5VWP2 391 aa21.54■■□□□ 1.04
CASC4-204ENST00000557945 PID1Q7Z2X4 250 aa21.54■■□□□ 1.04
CASC4-204ENST00000557945 MAML2Q8IZL2 1156 aaPredicted RBP21.54■■□□□ 1.04
CASC4-204ENST00000557945 MAGOHBQ96A72 148 aaKnown RBP21.54■■□□□ 1.04
CASC4-204ENST00000557945 TEKT5Q96M29 485 aa21.54■■□□□ 1.04
CASC4-204ENST00000557945 NUDCD1Q96RS6 583 aa21.54■■□□□ 1.04
CASC4-204ENST00000557945 TPSD1Q9BZJ3 242 aa21.54■■□□□ 1.04
CASC4-204ENST00000557945 USP29Q9HBJ7 922 aa21.54■■□□□ 1.04
CASC4-204ENST00000557945 RNF14Q9UBS8 474 aa21.54■■□□□ 1.04
CASC4-204ENST00000557945 DNTTP04053 509 aa21.53■■□□□ 1.04
CASC4-204ENST00000557945 SLC8A1P32418 973 aa21.53■■□□□ 1.04
CASC4-204ENST00000557945 NRLP54845 237 aa21.53■■□□□ 1.04
CASC4-204ENST00000557945 AP1S1P61966 158 aa21.53■■□□□ 1.04
CASC4-204ENST00000557945 DSC2Q02487 901 aa21.53■■□□□ 1.04
CASC4-204ENST00000557945 DMWDQ09019 674 aa21.53■■□□□ 1.04
CASC4-204ENST00000557945 DRICH1Q6PGQ1 229 aaPredicted RBP21.53■■□□□ 1.04
CASC4-204ENST00000557945 ZNF567Q8N184 647 aa21.53■■□□□ 1.04
CASC4-204ENST00000557945 TMIEQ8NEW7 156 aa21.53■■□□□ 1.04
CASC4-204ENST00000557945 KIF18AQ8NI77 898 aa21.53■■□□□ 1.04
CASC4-204ENST00000557945 GANCQ8TET4 914 aa21.53■■□□□ 1.04
CASC4-204ENST00000557945 NOD2Q9HC29 1040 aa21.53■■□□□ 1.04
CASC4-204ENST00000557945 FBXO4Q9UKT5 387 aa21.53■■□□□ 1.04
CASC4-204ENST00000557945 TRHDEQ9UKU6 1024 aa21.53■■□□□ 1.04
CASC4-204ENST00000557945 SARDHQ9UL12 918 aa21.53■■□□□ 1.04
CASC4-204ENST00000557945 MID1O15344 667 aa21.52■■□□□ 1.04
CASC4-204ENST00000557945 PIGNO95427 931 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms