RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 SARDHQ9UL12 918 aa15.5■□□□□ 0.07
NEDD1-213ENST00000557644 F5H423 210 aaPredicted RBP15.49■□□□□ 0.07
NEDD1-213ENST00000557644 ZBTB24O43167 697 aaPredicted RBP15.49■□□□□ 0.07
NEDD1-213ENST00000557644 NEBLO76041 1014 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 IGSF6O95976 241 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 GSRP00390 522 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 IHHQ14623 411 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 MYLK3Q32MK0 819 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 ANO7Q6IWH7 933 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 TMPRSS6Q8IU80 811 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 BBS5Q8N3I7 341 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 DTWD2Q8NBA8 298 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 OR2T3Q8NH03 318 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 KIF18AQ8NI77 898 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 MAGOHBQ96A72 148 aaKnown RBP15.49■□□□□ 0.07
NEDD1-213ENST00000557644 ZDHHC6Q9H6R6 413 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 ATP8A1Q9Y2Q0 1164 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 VPS13AQ96RL7 3174 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 PRR33A8MZF0 331 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 DLL1O00548 723 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 ZNF500O60304 480 aaPredicted RBP15.49■□□□□ 0.07
NEDD1-213ENST00000557644 GABRG2P18507 467 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 NDUFV2P19404 249 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 CR2P20023 1033 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 CHRNA3P32297 505 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 CD68P34810 354 aaPredicted RBP15.49■□□□□ 0.07
NEDD1-213ENST00000557644 CCR3P51677 355 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 DSC2Q02487 901 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 ARSIQ5FYB1 569 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 TMEM31Q5JXX7 168 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 C1orf210Q8IVY1 113 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 GLIS1Q8NBF1 620 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 MDGA1Q8NFP4 955 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 TSTD1Q8NFU3 115 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 CCDC110Q8TBZ0 833 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 OR8D1Q8WZ84 308 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 MRGPRX1Q96LB2 322 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 TEKT5Q96M29 485 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 SEMA3CQ99985 751 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 IER2Q9BTL4 223 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 RSPH9Q9H1X1 276 aaPredicted RBP15.49■□□□□ 0.07
NEDD1-213ENST00000557644 NOD2Q9HC29 1040 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 POLMQ9NP87 494 aaPredicted RBP15.49■□□□□ 0.07
NEDD1-213ENST00000557644 KLHL8Q9P2G9 620 aaPredicted RBP15.49■□□□□ 0.07
NEDD1-213ENST00000557644 WASF2Q9Y6W5 498 aa15.49■□□□□ 0.07
NEDD1-213ENST00000557644 K7ESF4 209 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 MTSS1O43312 755 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 LEFTY1O75610 366 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 PAFAH1B1P43034 410 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 NSUN2Q08J23 767 aaKnown RBP eCLIP15.48■□□□□ 0.07
NEDD1-213ENST00000557644 NIPAL4Q0D2K0 466 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 CYP1B1Q16678 543 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 DRICH1Q6PGQ1 229 aaPredicted RBP15.48■□□□□ 0.07
NEDD1-213ENST00000557644 PID1Q7Z2X4 250 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 PLPP6Q8IY26 295 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 MAML2Q8IZL2 1156 aaPredicted RBP15.48■□□□□ 0.07
NEDD1-213ENST00000557644 CCDC114Q96M63 670 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 HEPHQ9BQS7 1158 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 POLR1EQ9GZS1 481 aaKnown RBP15.48■□□□□ 0.07
NEDD1-213ENST00000557644 CD93Q9NPY3 652 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 IL36AQ9UHA7 158 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 PPM1HQ9ULR3 514 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 FARP1Q9Y4F1 1045 aaPredicted RBP15.48■□□□□ 0.07
NEDD1-213ENST00000557644 DMDP11532 3685 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 PIGNO95427 931 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 IFNB1P01574 187 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 IL1BP01584 269 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 ITGAVP06756 1048 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 ETS1P14921 441 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 PSMD8P48556 350 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 DMWDQ09019 674 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 MAMSTRQ6ZN01 415 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 SRLQ86TD4 932 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 ARRDC2Q8TBH0 407 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 DDX47Q9H0S4 455 aaKnown RBP15.48■□□□□ 0.07
NEDD1-213ENST00000557644 HOMER3Q9NSC5 361 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 RNF14Q9UBS8 474 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 CDC23Q9UJX2 597 aa15.48■□□□□ 0.07
NEDD1-213ENST00000557644 GOLGA6L10A0A0M3HER8 536 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 POP4O95707 220 aaKnown RBP15.47■□□□□ 0.07
NEDD1-213ENST00000557644 HSPA9P38646 679 aaKnown RBP15.47■□□□□ 0.07
NEDD1-213ENST00000557644 RPS14P62263 151 aaKnown RBP15.47■□□□□ 0.07
NEDD1-213ENST00000557644 ANKRD20A2Q5SQ80 823 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 ANKRD20A1Q5TYW2 823 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 ANKRD20A3Q5VUR7 823 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 CAMK1DQ8IU85 385 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 PGBD3Q8N328 593 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 C12orf50Q8NA57 414 aaPredicted RBP15.47■□□□□ 0.07
NEDD1-213ENST00000557644 PIP4K2CQ8TBX8 421 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 NUDCD1Q96RS6 583 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 SCUBE2Q9NQ36 999 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 AMACRQ9UHK6 382 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 PLK4O00444 970 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 MID1O15344 667 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 LAMTOR5O43504 91 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 PHF2O75151 1096 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 UGT2B4P06133 528 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 ZSCAN5DPP0CG00 497 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 NFKB1P19838 968 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 COILP38432 576 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms