RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 DPYSL2Q16555 572 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 TAZQ16635 292 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 LONRF2Q1L5Z9 754 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 BOLA3Q53S33 107 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 ALFQ53S48 1182 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 FAM133BQ5BKY9 247 aaKnown RBP5.45□□□□□ -1.54
ATXN3-244ENST00000556898 ANKRD20A8PQ5CZ79 823 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 FAM78AQ5JUQ0 283 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 BRMS1LQ5PSV4 323 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 HP1BP3Q5SSJ5 553 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-244ENST00000556898 LCE4AQ5TA78 99 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 SEL1L2Q5TEA6 688 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 TRIM68Q6AZZ1 485 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 TANGO2Q6ICL3 276 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 FBXL22Q6P050 247 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 C1orf228Q6PIY5 440 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 RTL10Q7L3V2 364 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 POLNQ7Z5Q5 900 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 CHSY1Q86X52 802 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 SLC13A5Q86YT5 568 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-244ENST00000556898 WFDC3Q8IUB2 231 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 ARID3BQ8IVW6 561 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-244ENST00000556898 BBS7Q8IWZ6 715 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 RCOR2Q8IZ40 523 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 MAML2Q8IZL2 1156 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-244ENST00000556898 CMTM8Q8IZV2 173 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 LGI2Q8N0V4 545 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 RASGEF1CQ8N431 466 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 ZNF276Q8N554 614 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 TTC8Q8TAM2 541 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 ZSCAN18Q8TBC5 510 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-244ENST00000556898 FAM71BQ8TC56 605 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 SH3RF2Q8TEC5 729 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 DEPDC1BQ8WUY9 529 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 TEKT4Q8WW24 435 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 C1orf54Q8WWF1 131 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 ATG4AQ8WYN0 398 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 FGF13Q92913 245 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 CELF6Q96J87 481 aaKnown RBP5.45□□□□□ -1.54
ATXN3-244ENST00000556898 ZFYVE19Q96K21 471 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 PBKQ96KB5 322 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 PRICKLE1Q96MT3 831 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-244ENST00000556898 CSPG4P5Q96PW8 444 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 RNF157Q96PX1 679 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 PRMT1Q99873 361 aaKnown RBP5.45□□□□□ -1.54
ATXN3-244ENST00000556898 TRIM62Q9BVG3 475 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 OSBPL8Q9BZF1 889 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 OSBPL6Q9BZF3 934 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 OSBPL2Q9H1P3 480 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 CARD9Q9H257 536 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 EPC1Q9H2F5 836 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 LINC00597Q9H2U6 94 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 SLITRK6Q9H5Y7 841 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 ARHGEF3Q9NR81 526 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 SLC2A4RGQ9NR83 387 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.45□□□□□ -1.54
ATXN3-244ENST00000556898 CACNA2D2Q9NY47 1150 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 DDX56Q9NY93 547 aaKnown RBP5.45□□□□□ -1.54
ATXN3-244ENST00000556898 MPP6Q9NZW5 540 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 VTI1BQ9UEU0 232 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 ZC3H7BQ9UGR2 993 aaKnown RBP5.45□□□□□ -1.54
ATXN3-244ENST00000556898 LCMT1Q9UIC8 334 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 VANGL2Q9ULK5 521 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 CLEC4EQ9ULY5 219 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 SH3BP1Q9Y3L3 701 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 HBS1LQ9Y450 684 aaKnown RBP5.45□□□□□ -1.54
ATXN3-244ENST00000556898 PCDHGA2Q9Y5H1 932 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 WNT6Q9Y6F9 365 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 ZFP37Q9Y6Q3 630 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-244ENST00000556898 NCOR2Q9Y618 2525 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 OBSL1O75147 1896 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 CLUHO75153 1309 aa5.45□□□□□ -1.54
ATXN3-244ENST00000556898 KANSL1LA0AUZ9 987 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 E9PAM4 449 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 ANHXE9PGG2 379 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 ZNF197O14709 1029 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 MFSD11O43934 449 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 CST8O60676 142 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 FBXO24O75426 580 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 ECEL1O95672 775 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 TUBB4AP04350 444 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 CELA3AP09093 270 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 GSTP1P09211 210 aaKnown RBP5.44□□□□□ -1.54
ATXN3-244ENST00000556898 DMDP11532 3685 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 ADH5P11766 374 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 LAMP2P13473 410 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 GLULP15104 373 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 PRLRP16471 622 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 ERCC2P18074 760 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 TGM1P22735 817 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 AVPR1AP37288 418 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 MAGEA9P43362 315 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 KCNJ1P48048 391 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 MLLT6P55198 1093 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-244ENST00000556898 TPI1P60174 286 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 RPS24P62847 133 aaKnown RBP5.44□□□□□ -1.54
ATXN3-244ENST00000556898 COG7P83436 770 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 OTUD4Q01804 1114 aaKnown RBP5.44□□□□□ -1.54
ATXN3-244ENST00000556898 PRKCQQ04759 706 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 CSTF1Q05048 431 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms