RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 SAMD14Q8IZD0 417 aaPredicted RBP4.84□□□□□ -1.63
SCFD1-221ENST00000556534 CPXM2Q8N436 756 aa4.84□□□□□ -1.63
SCFD1-221ENST00000556534 TEX45Q8NA69 505 aa4.84□□□□□ -1.63
SCFD1-221ENST00000556534 B4GALNT2Q8NHY0 566 aa4.84□□□□□ -1.63
SCFD1-221ENST00000556534 SLC35F5Q8WV83 523 aa4.84□□□□□ -1.63
SCFD1-221ENST00000556534 OIT3Q8WWZ8 545 aa4.84□□□□□ -1.63
SCFD1-221ENST00000556534 TMEM18Q96B42 140 aa4.84□□□□□ -1.63
SCFD1-221ENST00000556534 DCLK3Q9C098 648 aa4.84□□□□□ -1.63
SCFD1-221ENST00000556534 TTYH1Q9H313 450 aaPredicted RBP4.84□□□□□ -1.63
SCFD1-221ENST00000556534 SLC32A1Q9H598 525 aa4.84□□□□□ -1.63
SCFD1-221ENST00000556534 IFT80Q9P2H3 777 aaPredicted RBP4.84□□□□□ -1.63
SCFD1-221ENST00000556534 PDP2Q9P2J9 529 aa4.84□□□□□ -1.63
SCFD1-221ENST00000556534 ARID4BQ4LE39 1312 aaPredicted RBP4.83□□□□□ -1.64
SCFD1-221ENST00000556534 ADGRF5Q8IZF2 1346 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 LOC102724159A0A0B4J2E5 919 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 GOLGA6L10A0A0M3HER8 536 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 A0A1B0GVT2 93 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 FAM90A8PA6NJQ4 464 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 EBAG9O00559 213 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 SMAD6O43541 496 aaKnown RBP4.83□□□□□ -1.64
SCFD1-221ENST00000556534 SLC25A17O43808 307 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 PYGLP06737 847 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 FAM90A13PP0C7W8 464 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 FAM90A24PP0C7X0 464 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 HOXA11P31270 313 aaPredicted RBP4.83□□□□□ -1.64
SCFD1-221ENST00000556534 TTKP33981 857 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 PGM1P36871 562 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 BLKP51451 505 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 PMS2P54278 862 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 TDGQ13569 410 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 PWP2Q15269 919 aaKnown RBP4.83□□□□□ -1.64
SCFD1-221ENST00000556534 IL20RBQ6UXL0 311 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 ZNF367Q7RTV3 350 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 PRSS45Q7RTY3 260 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 RBFAQ8N0V3 343 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 PRR26Q8N8Z3 221 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 MCPH1Q8NEM0 835 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 GDPD5Q8WTR4 605 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 HTRA1Q92743 480 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 MIB2Q96AX9 1013 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 MSTO1Q9BUK6 570 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 SF3B5Q9BWJ5 86 aaKnown RBP4.83□□□□□ -1.64
SCFD1-221ENST00000556534 NPFFR1Q9GZQ6 430 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 PCDHA7Q9UN72 937 aa4.83□□□□□ -1.64
SCFD1-221ENST00000556534 EYA2O00167 538 aa4.82□□□□□ -1.64
SCFD1-221ENST00000556534 SOX30O94993 753 aa4.82□□□□□ -1.64
SCFD1-221ENST00000556534 SNHG28P0DPA3 235 aa4.82□□□□□ -1.64
SCFD1-221ENST00000556534 ABATP80404 500 aa4.82□□□□□ -1.64
SCFD1-221ENST00000556534 FAM27E3Q08E93 113 aa4.82□□□□□ -1.64
SCFD1-221ENST00000556534 Q0VFX4 171 aa4.82□□□□□ -1.64
SCFD1-221ENST00000556534 MAPK7Q13164 816 aa4.82□□□□□ -1.64
SCFD1-221ENST00000556534 ZNF766Q5HY98 468 aa4.82□□□□□ -1.64
SCFD1-221ENST00000556534 DNTTIP2Q5QJE6 756 aaKnown RBP4.82□□□□□ -1.64
SCFD1-221ENST00000556534 OTUD1Q5VV17 481 aaPredicted RBP4.82□□□□□ -1.64
SCFD1-221ENST00000556534 ATG9BQ674R7 924 aa4.82□□□□□ -1.64
SCFD1-221ENST00000556534 NCAPH2Q6IBW4 605 aa4.82□□□□□ -1.64
SCFD1-221ENST00000556534 MOB3CQ70IA8 216 aa4.82□□□□□ -1.64
SCFD1-221ENST00000556534 CHD1LQ86WJ1 897 aa4.82□□□□□ -1.64
SCFD1-221ENST00000556534 ZDHHC17Q8IUH5 632 aa4.82□□□□□ -1.64
SCFD1-221ENST00000556534 ZMIZ2Q8NF64 920 aa4.82□□□□□ -1.64
SCFD1-221ENST00000556534 RASSF8Q8NHQ8 419 aa4.82□□□□□ -1.64
SCFD1-221ENST00000556534 GPT2Q8TD30 523 aa4.82□□□□□ -1.64
SCFD1-221ENST00000556534 TBC1D22AQ8WUA7 517 aa4.82□□□□□ -1.64
SCFD1-221ENST00000556534 ZBTB10Q96DT7 871 aa4.82□□□□□ -1.64
SCFD1-221ENST00000556534 FUZQ9BT04 418 aa4.82□□□□□ -1.64
SCFD1-221ENST00000556534 INTS2Q9H0H0 1204 aaKnown RBP4.82□□□□□ -1.64
SCFD1-221ENST00000556534 WASH6PQ9NQA3 447 aa4.82□□□□□ -1.64
SCFD1-221ENST00000556534 BEX4Q9NWD9 120 aaPredicted RBP4.82□□□□□ -1.64
SCFD1-221ENST00000556534 PLK2Q9NYY3 685 aa4.82□□□□□ -1.64
SCFD1-221ENST00000556534 CNOT7Q9UIV1 285 aaKnown RBP4.82□□□□□ -1.64
SCFD1-221ENST00000556534 FZD10Q9ULW2 581 aa4.82□□□□□ -1.64
SCFD1-221ENST00000556534 TBX20Q9UMR3 447 aa4.82□□□□□ -1.64
SCFD1-221ENST00000556534 PTGDR2Q9Y5Y4 395 aa4.82□□□□□ -1.64
SCFD1-221ENST00000556534 LIASO43766 372 aa4.81□□□□□ -1.64
SCFD1-221ENST00000556534 GUCY1B2O75343 617 aa4.81□□□□□ -1.64
SCFD1-221ENST00000556534 URODP06132 367 aa4.81□□□□□ -1.64
SCFD1-221ENST00000556534 RYKP34925 604 aa4.81□□□□□ -1.64
SCFD1-221ENST00000556534 EFNA5P52803 228 aa4.81□□□□□ -1.64
SCFD1-221ENST00000556534 GALNT2Q10471 571 aa4.81□□□□□ -1.64
SCFD1-221ENST00000556534 NFIL3Q16649 462 aa4.81□□□□□ -1.64
SCFD1-221ENST00000556534 FNBP1LQ5T0N5 605 aa4.81□□□□□ -1.64
SCFD1-221ENST00000556534 SLC22A25Q6T423 547 aa4.81□□□□□ -1.64
SCFD1-221ENST00000556534 ZNF517Q6ZMY9 492 aaPredicted RBP4.81□□□□□ -1.64
SCFD1-221ENST00000556534 PATL1Q86TB9 770 aaKnown RBP4.81□□□□□ -1.64
SCFD1-221ENST00000556534 DENND6AQ8IWF6 608 aa4.81□□□□□ -1.64
SCFD1-221ENST00000556534 PLD5Q8N7P1 536 aa4.81□□□□□ -1.64
SCFD1-221ENST00000556534 NEXN-AS1Q8NBZ9 246 aa4.81□□□□□ -1.64
SCFD1-221ENST00000556534 TNIP2Q8NFZ5 429 aa4.81□□□□□ -1.64
SCFD1-221ENST00000556534 RNF183Q96D59 192 aa4.81□□□□□ -1.64
SCFD1-221ENST00000556534 MARK4Q96L34 752 aa4.81□□□□□ -1.64
SCFD1-221ENST00000556534 LBHD1Q9BQE6 289 aaPredicted RBP4.81□□□□□ -1.64
SCFD1-221ENST00000556534 SPATS2LQ9NUQ6 558 aaKnown RBP4.81□□□□□ -1.64
SCFD1-221ENST00000556534 PEMTQ9UBM1 199 aa4.81□□□□□ -1.64
SCFD1-221ENST00000556534 SLC25A10Q9UBX3 287 aaPredicted RBP4.81□□□□□ -1.64
SCFD1-221ENST00000556534 MYO6Q9UM54 1294 aa4.81□□□□□ -1.64
SCFD1-221ENST00000556534 SRPRBQ9Y5M8 271 aaKnown RBP4.81□□□□□ -1.64
SCFD1-221ENST00000556534 ARHGAP10A1A4S6 786 aa4.8□□□□□ -1.64
SCFD1-221ENST00000556534 GAGE10A6NGK3 116 aa4.8□□□□□ -1.64
SCFD1-221ENST00000556534 OR6C75A6NL08 312 aa4.8□□□□□ -1.64
SCFD1-221ENST00000556534 TEX22C9J3V5 150 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms