RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 C1orf216Q8TAB5 229 aa15.43■□□□□ 0.06
ACTN1-217ENST00000556203 LRIG1Q96JA1 1093 aa15.43■□□□□ 0.06
ACTN1-217ENST00000556203 EXOC2Q96KP1 924 aa15.43■□□□□ 0.06
ACTN1-217ENST00000556203 ORAI3Q9BRQ5 295 aa15.43■□□□□ 0.06
ACTN1-217ENST00000556203 RTKNQ9BST9 563 aa15.43■□□□□ 0.06
ACTN1-217ENST00000556203 GTPBP2Q9BX10 602 aaKnown RBP15.43■□□□□ 0.06
ACTN1-217ENST00000556203 CALN1Q9BXU9 219 aa15.43■□□□□ 0.06
ACTN1-217ENST00000556203 HDAC8Q9BY41 377 aa15.43■□□□□ 0.06
ACTN1-217ENST00000556203 KDM4CQ9H3R0 1056 aa15.43■□□□□ 0.06
ACTN1-217ENST00000556203 TMEM9BQ9NQ34 198 aa15.43■□□□□ 0.06
ACTN1-217ENST00000556203 LHX3Q9UBR4 397 aa15.43■□□□□ 0.06
ACTN1-217ENST00000556203 IPO11Q9UI26 975 aaKnown RBP15.43■□□□□ 0.06
ACTN1-217ENST00000556203 TFR2Q9UP52 801 aa15.43■□□□□ 0.06
ACTN1-217ENST00000556203 CFAP54Q96N23 3096 aa15.43■□□□□ 0.06
ACTN1-217ENST00000556203 TNRC6BQ9UPQ9 1833 aaKnown RBP15.43■□□□□ 0.06
ACTN1-217ENST00000556203 ARHGAP33O14559 1287 aa15.42■□□□□ 0.06
ACTN1-217ENST00000556203 PALMO75781 387 aa15.42■□□□□ 0.06
ACTN1-217ENST00000556203 NDUFA10O95299 355 aa15.42■□□□□ 0.06
ACTN1-217ENST00000556203 SYPP08247 313 aa15.42■□□□□ 0.06
ACTN1-217ENST00000556203 SERPINB6P35237 376 aa15.42■□□□□ 0.06
ACTN1-217ENST00000556203 NOP2P46087 812 aaKnown RBP15.42■□□□□ 0.06
ACTN1-217ENST00000556203 NEK3P51956 506 aa15.42■□□□□ 0.06
ACTN1-217ENST00000556203 TAS2R38P59533 333 aa15.42■□□□□ 0.06
ACTN1-217ENST00000556203 NUMA1Q14980 2115 aa15.42■□□□□ 0.06
ACTN1-217ENST00000556203 MAP7D3Q8IWC1 876 aa15.42■□□□□ 0.06
ACTN1-217ENST00000556203 ZNF670Q9BS34 389 aa15.42■□□□□ 0.06
ACTN1-217ENST00000556203 OSBPL1AQ9BXW6 950 aa15.42■□□□□ 0.06
ACTN1-217ENST00000556203 EBF2Q9HAK2 575 aa15.42■□□□□ 0.06
ACTN1-217ENST00000556203 PREBQ9HCU5 417 aa15.42■□□□□ 0.06
ACTN1-217ENST00000556203 TM9SF3Q9HD45 589 aa15.42■□□□□ 0.06
ACTN1-217ENST00000556203 LUC7LQ9NQ29 371 aaKnown RBP15.42■□□□□ 0.06
ACTN1-217ENST00000556203 IMPACTQ9P2X3 320 aa15.42■□□□□ 0.06
ACTN1-217ENST00000556203 EPN1Q9Y6I3 576 aaPredicted RBP15.42■□□□□ 0.06
ACTN1-217ENST00000556203 NUP205Q92621 2012 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 DCDC2BA2VCK2 349 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 INSIG1O15503 277 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 UGT2B4P06133 528 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 ADRB3P13945 408 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 COMTP21964 271 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 MAT2AP31153 395 aaKnown RBP15.41■□□□□ 0.06
ACTN1-217ENST00000556203 SLC1A1P43005 524 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 AFF3P51826 1226 aaKnown RBP15.41■□□□□ 0.06
ACTN1-217ENST00000556203 RAD51Q06609 339 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 IL10RBQ08334 325 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 GRIK2Q13002 908 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 RFTN1Q14699 578 aaPredicted RBP15.41■□□□□ 0.06
ACTN1-217ENST00000556203 ANKRD20A8PQ5CZ79 823 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 ZNF805Q5CZA5 627 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 FBXL19Q6PCT2 694 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 LAYNQ6UX15 382 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 RAD9BQ6WBX8 426 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 PARS2Q7L3T8 475 aaKnown RBP15.41■□□□□ 0.06
ACTN1-217ENST00000556203 TRIM69Q86WT6 500 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 OR2I1PQ8NGU4 316 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 PCDH19Q8TAB3 1148 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 RAPGEF5Q92565 580 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 VOPP1Q96AW1 172 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 SLC6A18Q96N87 628 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 BAG1Q99933 345 aaPredicted RBP15.41■□□□□ 0.06
ACTN1-217ENST00000556203 CINPQ9BW66 212 aaPredicted RBP15.41■□□□□ 0.06
ACTN1-217ENST00000556203 TPX2Q9ULW0 747 aaKnown RBP15.41■□□□□ 0.06
ACTN1-217ENST00000556203 HYOU1Q9Y4L1 999 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 CHD5Q8TDI0 1954 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 GON4LQ3T8J9 2241 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 RALGAPA1Q6GYQ0 2036 aa15.41■□□□□ 0.06
ACTN1-217ENST00000556203 NYNRINQ9P2P1 1898 aaKnown RBP15.4■□□□□ 0.06
ACTN1-217ENST00000556203 A0A1B0GVT2 93 aa15.4■□□□□ 0.06
ACTN1-217ENST00000556203 LRRD1A4D1F6 860 aa15.4■□□□□ 0.06
ACTN1-217ENST00000556203 C16orf96A6NNT2 1141 aa15.4■□□□□ 0.06
ACTN1-217ENST00000556203 LATO43561 262 aa15.4■□□□□ 0.06
ACTN1-217ENST00000556203 SPOPO43791 374 aa15.4■□□□□ 0.06
ACTN1-217ENST00000556203 MFSD11O43934 449 aa15.4■□□□□ 0.06
ACTN1-217ENST00000556203 RNGTTO60942 597 aaKnown RBP15.4■□□□□ 0.06
ACTN1-217ENST00000556203 IPO7O95373 1038 aaKnown RBP15.4■□□□□ 0.06
ACTN1-217ENST00000556203 TNNT1P13805 278 aa15.4■□□□□ 0.06
ACTN1-217ENST00000556203 KDELR1P24390 212 aa15.4■□□□□ 0.06
ACTN1-217ENST00000556203 CSNK1EP49674 416 aaKnown RBP15.4■□□□□ 0.06
ACTN1-217ENST00000556203 TEAD4Q15561 434 aa15.4■□□□□ 0.06
ACTN1-217ENST00000556203 UAP1L1Q3KQV9 507 aa15.4■□□□□ 0.06
ACTN1-217ENST00000556203 TMCO4Q5TGY1 634 aa15.4■□□□□ 0.06
ACTN1-217ENST00000556203 NCBP2-AS2Q69YL0 99 aa15.4■□□□□ 0.06
ACTN1-217ENST00000556203 GDPD4Q6W3E5 623 aa15.4■□□□□ 0.06
ACTN1-217ENST00000556203 DGLUCYQ7Z3D6 616 aa15.4■□□□□ 0.06
ACTN1-217ENST00000556203 PRPF39Q86UA1 669 aaKnown RBP15.4■□□□□ 0.06
ACTN1-217ENST00000556203 MINDY1Q8N5J2 469 aa15.4■□□□□ 0.06
ACTN1-217ENST00000556203 ATPAF2Q8N5M1 289 aa15.4■□□□□ 0.06
ACTN1-217ENST00000556203 TSEN2Q8NCE0 465 aaKnown RBP15.4■□□□□ 0.06
ACTN1-217ENST00000556203 FAF2Q96CS3 445 aa15.4■□□□□ 0.06
ACTN1-217ENST00000556203 SERAC1Q96JX3 654 aa15.4■□□□□ 0.06
ACTN1-217ENST00000556203 KLHL32Q96NJ5 620 aa15.4■□□□□ 0.06
ACTN1-217ENST00000556203 ZDHHC5Q9C0B5 715 aa15.4■□□□□ 0.06
ACTN1-217ENST00000556203 AASDHPPTQ9NRN7 309 aa15.4■□□□□ 0.06
ACTN1-217ENST00000556203 FRYLO94915 3013 aa15.39■□□□□ 0.05
ACTN1-217ENST00000556203 A0A0A6YYK5 440 aaPredicted RBP15.39■□□□□ 0.05
ACTN1-217ENST00000556203 A0A1W2PQU0 124 aa15.39■□□□□ 0.05
ACTN1-217ENST00000556203 BUB1BO60566 1050 aaPredicted RBP15.39■□□□□ 0.05
ACTN1-217ENST00000556203 PCDH8O95206 1070 aa15.39■□□□□ 0.05
ACTN1-217ENST00000556203 PIGNO95427 931 aa15.39■□□□□ 0.05
ACTN1-217ENST00000556203 KRT1P04264 644 aa15.39■□□□□ 0.05
ACTN1-217ENST00000556203 RGRP47804 291 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms