RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 SPINK14Q6IE38 97 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 C19orf48Q6RUI8 117 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 NEK10Q6ZWH5 1172 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 STXBP4Q6ZWJ1 553 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 EPHX4Q8IUS5 362 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 ZDHHC23Q8IYP9 409 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 VPS52Q8N1B4 723 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 FAM76AQ8TAV0 307 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 PARD3BQ8TEW8 1205 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 HDAC7Q8WUI4 952 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 HMGB4Q8WW32 186 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 ZNF524Q96C55 264 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 TXNDC15Q96J42 360 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 EGFL8Q99944 293 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 CERS4Q9HA82 394 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 SEL1LQ9UBV2 794 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 RCE1Q9Y256 329 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 SLC45A1Q9Y2W3 748 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 DDAH2O95865 285 aa3.15□□□□□ -1.91
SRP54-207ENST00000555535 HLA-DQA2P01906 255 aa3.15□□□□□ -1.91
SRP54-207ENST00000555535 CYP21A2P08686 494 aa3.15□□□□□ -1.91
SRP54-207ENST00000555535 TIMP3P35625 211 aa3.15□□□□□ -1.91
SRP54-207ENST00000555535 IRX6P78412 446 aaPredicted RBP3.15□□□□□ -1.91
SRP54-207ENST00000555535 CTTNQ14247 550 aaKnown RBP3.15□□□□□ -1.91
SRP54-207ENST00000555535 LONRF1Q17RB8 773 aa3.15□□□□□ -1.91
SRP54-207ENST00000555535 ZACNQ401N2 412 aa3.15□□□□□ -1.91
SRP54-207ENST00000555535 ZNF497Q6ZNH5 498 aa3.15□□□□□ -1.91
SRP54-207ENST00000555535 SLC26A9Q7LBE3 791 aa3.15□□□□□ -1.91
SRP54-207ENST00000555535 PJA1Q8NG27 643 aa3.15□□□□□ -1.91
SRP54-207ENST00000555535 GPT2Q8TD30 523 aa3.15□□□□□ -1.91
SRP54-207ENST00000555535 STYXQ8WUJ0 223 aa3.15□□□□□ -1.91
SRP54-207ENST00000555535 FAR1Q8WVX9 515 aa3.15□□□□□ -1.91
SRP54-207ENST00000555535 TRIM31Q9BZY9 425 aa3.15□□□□□ -1.91
SRP54-207ENST00000555535 EBF2Q9HAK2 575 aa3.15□□□□□ -1.91
SRP54-207ENST00000555535 PDE11AQ9HCR9 933 aa3.15□□□□□ -1.91
SRP54-207ENST00000555535 LIN7CQ9NUP9 197 aaKnown RBP3.15□□□□□ -1.91
SRP54-207ENST00000555535 KLHL42Q9P2K6 505 aa3.15□□□□□ -1.91
SRP54-207ENST00000555535 SLC25A13Q9UJS0 675 aa3.15□□□□□ -1.91
SRP54-207ENST00000555535 OSGIN2Q9Y236 505 aa3.15□□□□□ -1.91
SRP54-207ENST00000555535 C17orf102A2RUQ5 167 aa3.14□□□□□ -1.91
SRP54-207ENST00000555535 NPIPB11E5RHQ5 1161 aa3.14□□□□□ -1.91
SRP54-207ENST00000555535 TNFRSF6BO95407 300 aa3.14□□□□□ -1.91
SRP54-207ENST00000555535 GYS1P13807 737 aa3.14□□□□□ -1.91
SRP54-207ENST00000555535 KCNA5P22460 613 aa3.14□□□□□ -1.91
SRP54-207ENST00000555535 OAZ1P54368 228 aa3.14□□□□□ -1.91
SRP54-207ENST00000555535 GRIK2Q13002 908 aa3.14□□□□□ -1.91
SRP54-207ENST00000555535 PPIGQ13427 754 aaKnown RBP eCLIP3.14□□□□□ -1.917e-9■□□□□ 8.7
SRP54-207ENST00000555535 XKR9Q5GH70 373 aa3.14□□□□□ -1.91
SRP54-207ENST00000555535 ZNF484Q5JVG2 852 aa3.14□□□□□ -1.91
SRP54-207ENST00000555535 ZC2HC1BQ5TFG8 222 aa3.14□□□□□ -1.91
SRP54-207ENST00000555535 SERPINA11Q86U17 422 aa3.14□□□□□ -1.91
SRP54-207ENST00000555535 RBFAQ8N0V3 343 aa3.14□□□□□ -1.91
SRP54-207ENST00000555535 KCNJ9Q92806 393 aa3.14□□□□□ -1.91
SRP54-207ENST00000555535 MUL1Q969V5 352 aa3.14□□□□□ -1.91
SRP54-207ENST00000555535 TMEM18Q96B42 140 aa3.14□□□□□ -1.91
SRP54-207ENST00000555535 FRG2BQ96QU4 278 aa3.14□□□□□ -1.91
SRP54-207ENST00000555535 MSTO1Q9BUK6 570 aa3.14□□□□□ -1.91
SRP54-207ENST00000555535 LHPPQ9H008 270 aa3.14□□□□□ -1.91
SRP54-207ENST00000555535 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.14□□□□□ -1.91
SRP54-207ENST00000555535 DYTNA2CJ06 578 aa3.13□□□□□ -1.91
SRP54-207ENST00000555535 TARSL2A2RTX5 802 aaKnown RBP3.13□□□□□ -1.91
SRP54-207ENST00000555535 RNMTO43148 476 aaKnown RBP3.13□□□□□ -1.91
SRP54-207ENST00000555535 KIF1CO43896 1103 aaKnown RBP3.13□□□□□ -1.91
SRP54-207ENST00000555535 CRLF1O75462 422 aa3.13□□□□□ -1.91
SRP54-207ENST00000555535 CETPP11597 493 aa3.13□□□□□ -1.91
SRP54-207ENST00000555535 ABCB4P21439 1286 aa3.13□□□□□ -1.91
SRP54-207ENST00000555535 ALDH4A1P30038 563 aa3.13□□□□□ -1.91
SRP54-207ENST00000555535 AVPR2P30518 371 aa3.13□□□□□ -1.91
SRP54-207ENST00000555535 RFC1P35251 1148 aaPredicted RBP3.13□□□□□ -1.91
SRP54-207ENST00000555535 CLCNKBP51801 687 aa3.13□□□□□ -1.91
SRP54-207ENST00000555535 DSCR10P59022 87 aa3.13□□□□□ -1.91
SRP54-207ENST00000555535 SETMARQ53H47 684 aaPredicted RBP3.13□□□□□ -1.91
SRP54-207ENST00000555535 TBC1D9BQ66K14 1250 aa3.13□□□□□ -1.91
SRP54-207ENST00000555535 WDR5BQ86VZ2 330 aa3.13□□□□□ -1.91
SRP54-207ENST00000555535 SCN4BQ8IWT1 228 aa3.13□□□□□ -1.91
SRP54-207ENST00000555535 PGBD5Q8N414 524 aa3.13□□□□□ -1.91
SRP54-207ENST00000555535 CADM4Q8NFZ8 388 aa3.13□□□□□ -1.91
SRP54-207ENST00000555535 RSC1A1Q92681 617 aa3.13□□□□□ -1.91
SRP54-207ENST00000555535 ZNF501Q96CX3 271 aaPredicted RBP3.13□□□□□ -1.91
SRP54-207ENST00000555535 CCDC138Q96M89 665 aa3.13□□□□□ -1.91
SRP54-207ENST00000555535 NPFFR1Q9GZQ6 430 aa3.13□□□□□ -1.91
SRP54-207ENST00000555535 ZFP57Q9NU63 452 aa3.13□□□□□ -1.91
SRP54-207ENST00000555535 DAPP1Q9UN19 280 aa3.13□□□□□ -1.91
SRP54-207ENST00000555535 KLF2Q9Y5W3 355 aaPredicted RBP3.13□□□□□ -1.91
SRP54-207ENST00000555535 A0A1B0GVM2 712 aa3.12□□□□□ -1.91
SRP54-207ENST00000555535 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.12□□□□□ -1.91
SRP54-207ENST00000555535 C17orf100A8MU93 164 aa3.12□□□□□ -1.91
SRP54-207ENST00000555535 KDM4EB2RXH2 506 aaPredicted RBP3.12□□□□□ -1.91
SRP54-207ENST00000555535 GSTM2P28161 218 aa3.12□□□□□ -1.91
SRP54-207ENST00000555535 DPP6P42658 865 aa3.12□□□□□ -1.91
SRP54-207ENST00000555535 PCP4P48539 62 aa3.12□□□□□ -1.91
SRP54-207ENST00000555535 CDK7P50613 346 aa3.12□□□□□ -1.91
SRP54-207ENST00000555535 ZNF132P52740 706 aa3.12□□□□□ -1.91
SRP54-207ENST00000555535 ALKBH1Q13686 389 aaKnown RBP3.12□□□□□ -1.91
SRP54-207ENST00000555535 CALCRLQ16602 461 aa3.12□□□□□ -1.91
SRP54-207ENST00000555535 SYT16Q17RD7 645 aa3.12□□□□□ -1.91
SRP54-207ENST00000555535 GALNTL6Q49A17 601 aa3.12□□□□□ -1.91
SRP54-207ENST00000555535 GXYLT1Q4G148 440 aa3.12□□□□□ -1.91
SRP54-207ENST00000555535 LRRC24Q50LG9 513 aa3.12□□□□□ -1.91
SRP54-207ENST00000555535 ARHGAP11AQ6P4F7 1023 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms