RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 DOK2O60496 412 aa5.71□□□□□ -1.5
VRK1-205ENST00000555402 CCNDBP1O95273 360 aa5.71□□□□□ -1.5
VRK1-205ENST00000555402 SCGB1D1O95968 90 aa5.71□□□□□ -1.5
VRK1-205ENST00000555402 CD63P08962 238 aa5.71□□□□□ -1.5
VRK1-205ENST00000555402 PSMA4P25789 261 aaKnown RBP5.71□□□□□ -1.5
VRK1-205ENST00000555402 NFKBIAP25963 317 aa5.71□□□□□ -1.5
VRK1-205ENST00000555402 KLRC2P26717 231 aa5.71□□□□□ -1.5
VRK1-205ENST00000555402 HOXA7P31268 230 aaPredicted RBP5.71□□□□□ -1.5
VRK1-205ENST00000555402 FMO4P31512 558 aa5.71□□□□□ -1.5
VRK1-205ENST00000555402 RGS2P41220 211 aa5.71□□□□□ -1.5
VRK1-205ENST00000555402 RARSP54136 660 aaKnown RBP5.71□□□□□ -1.5
VRK1-205ENST00000555402 EIF3BP55884 814 aaKnown RBP5.71□□□□□ -1.5
VRK1-205ENST00000555402 SNX30Q5VWJ9 437 aa5.71□□□□□ -1.5
VRK1-205ENST00000555402 FAM205BPQ63HN1 556 aa5.71□□□□□ -1.5
VRK1-205ENST00000555402 KLHL24Q6TFL4 600 aa5.71□□□□□ -1.5
VRK1-205ENST00000555402 IL20RBQ6UXL0 311 aa5.71□□□□□ -1.5
VRK1-205ENST00000555402 PXKQ7Z7A4 578 aa5.71□□□□□ -1.5
VRK1-205ENST00000555402 TADA2BQ86TJ2 420 aa5.71□□□□□ -1.5
VRK1-205ENST00000555402 ADGRF4Q8IZF3 695 aa5.71□□□□□ -1.5
VRK1-205ENST00000555402 ADSSL1Q8N142 457 aa5.71□□□□□ -1.5
VRK1-205ENST00000555402 ZMIZ2Q8NF64 920 aa5.71□□□□□ -1.5
VRK1-205ENST00000555402 MARK4Q96L34 752 aa5.71□□□□□ -1.5
VRK1-205ENST00000555402 GPR34Q9UPC5 381 aa5.71□□□□□ -1.5
VRK1-205ENST00000555402 ICKQ9UPZ9 632 aa5.71□□□□□ -1.5
VRK1-205ENST00000555402 KDM3AQ9Y4C1 1321 aa5.71□□□□□ -1.5
VRK1-205ENST00000555402 SLC22A23A1A5C7 686 aa5.7□□□□□ -1.5
VRK1-205ENST00000555402 TARSL2A2RTX5 802 aaKnown RBP5.7□□□□□ -1.5
VRK1-205ENST00000555402 DPPA5A6NC42 116 aa5.7□□□□□ -1.5
VRK1-205ENST00000555402 PABPN1LA6NDY0 278 aaKnown RBP5.7□□□□□ -1.5
VRK1-205ENST00000555402 NPIPB15A6NHN6 443 aaPredicted RBP5.7□□□□□ -1.5
VRK1-205ENST00000555402 FIBPO43427 364 aa5.7□□□□□ -1.5
VRK1-205ENST00000555402 TACC1O75410 805 aa5.7□□□□□ -1.5
VRK1-205ENST00000555402 ADAP00813 363 aa5.7□□□□□ -1.5
VRK1-205ENST00000555402 SERPINC1P01008 464 aa5.7□□□□□ -1.5
VRK1-205ENST00000555402 GALTP07902 379 aa5.7□□□□□ -1.5
VRK1-205ENST00000555402 TFEBP19484 476 aa5.7□□□□□ -1.5
VRK1-205ENST00000555402 SLC12A2P55011 1212 aa5.7□□□□□ -1.5
VRK1-205ENST00000555402 ZNF268Q14587 947 aaPredicted RBP5.7□□□□□ -1.5
VRK1-205ENST00000555402 LRIG3Q6UXM1 1119 aa5.7□□□□□ -1.5
VRK1-205ENST00000555402 IRF2BP2Q7Z5L9 587 aa5.7□□□□□ -1.5
VRK1-205ENST00000555402 CCDC25Q86WR0 208 aa5.7□□□□□ -1.5
VRK1-205ENST00000555402 NANOGP1Q8N7R0 232 aa5.7□□□□□ -1.5
VRK1-205ENST00000555402 PDILTQ8N807 584 aa5.7□□□□□ -1.5
VRK1-205ENST00000555402 NUDT16L1Q9BRJ7 211 aaKnown RBP5.7□□□□□ -1.5
VRK1-205ENST00000555402 HEMGNQ9BXL5 484 aa5.7□□□□□ -1.5
VRK1-205ENST00000555402 BRF2Q9HAW0 419 aa5.7□□□□□ -1.5
VRK1-205ENST00000555402 MLXIPLQ9NP71 852 aa5.7□□□□□ -1.5
VRK1-205ENST00000555402 SEPT11Q9NVA2 429 aaKnown RBP5.7□□□□□ -1.5
VRK1-205ENST00000555402 NLKQ9UBE8 527 aa5.7□□□□□ -1.5
VRK1-205ENST00000555402 SLC45A1Q9Y2W3 748 aa5.7□□□□□ -1.5
VRK1-205ENST00000555402 ARHGAP10A1A4S6 786 aa5.69□□□□□ -1.5
VRK1-205ENST00000555402 POU1F1P28069 291 aa5.69□□□□□ -1.5
VRK1-205ENST00000555402 MAPK4P31152 587 aa5.69□□□□□ -1.5
VRK1-205ENST00000555402 CIITAP33076 1130 aa5.69□□□□□ -1.5
VRK1-205ENST00000555402 MLH1P40692 756 aa5.69□□□□□ -1.5
VRK1-205ENST00000555402 RPL7AP62424 266 aaKnown RBP5.69□□□□□ -1.5
VRK1-205ENST00000555402 MEA1Q16626 185 aa5.69□□□□□ -1.5
VRK1-205ENST00000555402 PLK5Q496M5 336 aa5.69□□□□□ -1.5
VRK1-205ENST00000555402 C17orf99Q6UX52 265 aa5.69□□□□□ -1.5
VRK1-205ENST00000555402 MOB3CQ70IA8 216 aa5.69□□□□□ -1.5
VRK1-205ENST00000555402 PRSS45Q7RTY3 260 aa5.69□□□□□ -1.5
VRK1-205ENST00000555402 FAM160B2Q86V87 743 aa5.69□□□□□ -1.5
VRK1-205ENST00000555402 TICAM2Q86XR7 235 aa5.69□□□□□ -1.5
VRK1-205ENST00000555402 NRACQ8N912 160 aa5.69□□□□□ -1.5
VRK1-205ENST00000555402 C11orf65Q8NCR3 313 aa5.69□□□□□ -1.5
VRK1-205ENST00000555402 PRSS3P2Q8NHM4 247 aa5.69□□□□□ -1.5
VRK1-205ENST00000555402 TEFMQ96QE5 360 aaKnown RBP5.69□□□□□ -1.5
VRK1-205ENST00000555402 PIP5K1AQ99755 562 aa5.69□□□□□ -1.5
VRK1-205ENST00000555402 ITPAQ9BY32 194 aa5.69□□□□□ -1.5
VRK1-205ENST00000555402 FRMD8Q9BZ67 464 aaPredicted RBP5.69□□□□□ -1.5
VRK1-205ENST00000555402 HIPK3Q9H422 1215 aa5.69□□□□□ -1.5
VRK1-205ENST00000555402 CXorf56Q9H5V9 222 aa5.69□□□□□ -1.5
VRK1-205ENST00000555402 PDGFCQ9NRA1 345 aa5.69□□□□□ -1.5
VRK1-205ENST00000555402 SNTG1Q9NSN8 517 aa5.69□□□□□ -1.5
VRK1-205ENST00000555402 VPS28Q9UK41 221 aa5.69□□□□□ -1.5
VRK1-205ENST00000555402 PCDHGB5Q9Y5G0 923 aa5.69□□□□□ -1.5
VRK1-205ENST00000555402 GTPBP1O00178 669 aaKnown RBP5.68□□□□□ -1.5
VRK1-205ENST00000555402 HNRNPCL1O60812 293 aaKnown RBP5.68□□□□□ -1.5
VRK1-205ENST00000555402 PTP4A3O75365 173 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 SEC14L2O76054 403 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 DDAH2O95865 285 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 LAMP2P13473 410 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 ALOX12P18054 663 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 BLKP51451 505 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 STIM1Q13586 685 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 CCNG2Q16589 344 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 Q4G0T1 1027 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 KIAA1755Q5JYT7 1200 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 VWA5B1Q5TIE3 1220 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 ZNF813Q6ZN06 617 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 IKBIPQ70UQ0 350 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 GPAT4Q86UL3 456 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 IGFN1Q86VF2 1251 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 C8orf58Q8NAV2 365 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 GDPD5Q8WTR4 605 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 FAR1Q8WVX9 515 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 USP6NLQ92738 828 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 KAT2AQ92830 837 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 MAP4K1Q92918 833 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 SMARCE1Q969G3 411 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms