RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 RGS2P41220 211 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 GABRB2P47870 512 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 VEPH1Q14D04 833 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 CCNG2Q16589 344 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 HIST2H2ACQ16777 129 aaPredicted RBP5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 C6orf10Q5SRN2 563 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 FASTKD5Q7L8L6 764 aaKnown RBP5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 YTHDF3Q7Z739 585 aaKnown RBP5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 SERPINA11Q86U17 422 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 GPAT4Q86UL3 456 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 TRIM74Q86UV6 250 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 TRIM73Q86UV7 250 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 ANKRD13BQ86YJ7 626 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 CADM4Q8NFZ8 388 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 OR4N2Q8NGD1 307 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 SMARCE1Q969G3 411 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 ZNF333Q96JL9 665 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 PIP5K1AQ99755 562 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 H2AFJQ9BTM1 129 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 QTRT1Q9BXR0 403 aaKnown RBP5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 PRSS22Q9GZN4 317 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 MUC13Q9H3R2 512 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 AAMDCQ9H7C9 122 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 ADARB2Q9NS39 739 aaKnown RBP5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 THSD1Q9NS62 852 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 SEL1LQ9UBV2 794 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 RAP2CQ9Y3L5 183 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 PSAT1Q9Y617 370 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 PIAS3Q9Y6X2 628 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 DDTLA6NHG4 134 aaPredicted RBP5.72□□□□□ -1.49
CKS1BP1-201ENST00000555221 LRRC53A6NM62 1247 aa5.72□□□□□ -1.49
CKS1BP1-201ENST00000555221 E5RJQ4 531 aa5.72□□□□□ -1.49
CKS1BP1-201ENST00000555221 EBAG9O00559 213 aa5.72□□□□□ -1.49
CKS1BP1-201ENST00000555221 TLR2O60603 784 aa5.72□□□□□ -1.49
CKS1BP1-201ENST00000555221 CNOT3O75175 753 aaKnown RBP5.72□□□□□ -1.49
CKS1BP1-201ENST00000555221 LDHCP07864 332 aa5.72□□□□□ -1.49
CKS1BP1-201ENST00000555221 MMP3P08254 477 aa5.72□□□□□ -1.49
CKS1BP1-201ENST00000555221 CENPAP49450 140 aa5.72□□□□□ -1.49
CKS1BP1-201ENST00000555221 DRG2P55039 364 aaKnown RBP5.72□□□□□ -1.49
CKS1BP1-201ENST00000555221 INHBEP58166 350 aa5.72□□□□□ -1.49
CKS1BP1-201ENST00000555221 SLC18A2Q05940 514 aa5.72□□□□□ -1.49
CKS1BP1-201ENST00000555221 SMTNL2Q2TAL5 461 aa5.72□□□□□ -1.49
CKS1BP1-201ENST00000555221 PIK3CD-AS1Q5SR53 167 aa5.72□□□□□ -1.49
CKS1BP1-201ENST00000555221 NEK9Q8TD19 979 aa5.72□□□□□ -1.49
CKS1BP1-201ENST00000555221 EME1Q96AY2 570 aa5.72□□□□□ -1.49
CKS1BP1-201ENST00000555221 FAM149B1Q96BN6 582 aa5.72□□□□□ -1.49
CKS1BP1-201ENST00000555221 HEMGNQ9BXL5 484 aa5.72□□□□□ -1.49
CKS1BP1-201ENST00000555221 TASP1Q9H6P5 420 aa5.72□□□□□ -1.49
CKS1BP1-201ENST00000555221 EIF2B3Q9NR50 452 aaKnown RBP5.72□□□□□ -1.49
CKS1BP1-201ENST00000555221 NCKIPSDQ9NZQ3 722 aa5.72□□□□□ -1.49
CKS1BP1-201ENST00000555221 LIMA1Q9UHB6 759 aaKnown RBP5.72□□□□□ -1.49
CKS1BP1-201ENST00000555221 ADGRF5Q8IZF2 1346 aa5.72□□□□□ -1.49
CKS1BP1-201ENST00000555221 CBY3A6NI87 242 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 PRSS47A8MTI9 375 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 K7ENM7 598 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 TGFB1I1O43294 461 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 TLX3O43711 291 aaPredicted RBP5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 TOP3BO95985 862 aaKnown RBP5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 MYZAPP0CAP1 466 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 PCNAP12004 261 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 RFC1P35251 1148 aaPredicted RBP5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 OLR1P78380 273 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 GAD2Q05329 585 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 GOLGA8DPQ0D2H9 430 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 PKP1Q13835 747 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 SUPT20HL1Q3ZLR7 823 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 TXNDC8Q6A555 127 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 HMBOX1Q6NT76 420 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 FAM83HQ6ZRV2 1179 aaPredicted RBP5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 BRINP3Q76B58 766 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 TBC1D26Q86UD7 250 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 CAMK1DQ8IU85 385 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 LRRC57Q8N9N7 239 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 PRSS3P2Q8NHM4 247 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 IGFBPL1Q8WX77 278 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 ATOH1Q92858 354 aaPredicted RBP5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 SDF4Q9BRK5 362 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 WDR6Q9NNW5 1121 aaKnown RBP5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 NRIP3Q9NQ35 241 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 SPATS2LQ9NUQ6 558 aaKnown RBP5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 TMEM184CQ9NVA4 438 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 NSMCE4AQ9NXX6 385 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 EHD2Q9NZN4 543 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 A4GNTQ9UNA3 340 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 CARD8Q9Y2G2 431 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 KCNE2Q9Y6J6 123 aa5.71□□□□□ -1.5
CKS1BP1-201ENST00000555221 KCNU1A8MYU2 1149 aa5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 EIF3CLB5ME19 914 aaKnown RBP5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 GTPBP1O00178 669 aaKnown RBP5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 TAF4O00268 1085 aa5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 SLC25A17O43808 307 aa5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 PTP4A3O75365 173 aa5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 HSP90AA1P07900 732 aaKnown RBP5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 CELA2AP08217 269 aa5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 CTPS1P17812 591 aa5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 KELP23276 732 aa5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 NFKBIAP25963 317 aa5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 CD38P28907 300 aa5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 ICAM3P32942 547 aa5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 MLH1P40692 756 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms