RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 A0A1W2PP55 124 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 TCRBV5S1A1TA0A578 114 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 I6L893 689 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-214ENST00000554604 PSTPIP1O43586 416 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 BNIP3LO60238 219 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 PHF2O75151 1096 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 GJB6O95452 261 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 ADH1BP00325 375 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 PYGMP11217 842 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 KRT3P12035 628 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 CSRP1P21291 193 aaKnown RBP12.69□□□□□ -0.38
SHMT2-214ENST00000554604 CHRNA3P32297 505 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 CARSP49589 748 aaKnown RBP12.69□□□□□ -0.38
SHMT2-214ENST00000554604 MRPS25P82663 173 aaKnown RBP12.69□□□□□ -0.38
SHMT2-214ENST00000554604 C15orf59Q2T9L4 293 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-214ENST00000554604 ALFQ53S48 1182 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 C6orf118Q5T5N4 469 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 N4BP2L1Q5TBK1 243 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-214ENST00000554604 SETD3Q86TU7 594 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-214ENST00000554604 SLC13A5Q86YT5 568 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-214ENST00000554604 MREGQ8N565 214 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 OR52K2Q8NGK3 314 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 OR2I1PQ8NGU4 316 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 FAM71BQ8TC56 605 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 MAIP1Q8WWC4 291 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 ALG14Q96F25 216 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 FAM129BQ96TA1 746 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 ZDHHC5Q9C0B5 715 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 RAB17Q9H0T7 212 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 SLC32A1Q9H598 525 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 FAM114A2Q9NRY5 505 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 MPP6Q9NZW5 540 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 IP6K2Q9UHH9 426 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-214ENST00000554604 MAP1BP46821 2468 aaKnown RBP12.69□□□□□ -0.38
SHMT2-214ENST00000554604 CHD5Q8TDI0 1954 aa12.69□□□□□ -0.38
SHMT2-214ENST00000554604 EPG5Q9HCE0 2579 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 ZSCAN5CA6NGD5 496 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-214ENST00000554604 LRRC72A6NJI9 287 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 C2CD4BA6NLJ0 364 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 DRGXA6NNA5 263 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 ATP9BO43861 1147 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 ENDOD1O94919 500 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 CEACAM1P13688 526 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 VAV1P15498 845 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 C5AR1P21730 350 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 PTPN9P43378 593 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 AFF3P51826 1226 aaKnown RBP12.68□□□□□ -0.38
SHMT2-214ENST00000554604 GSCP56915 257 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-214ENST00000554604 GRIK2Q13002 908 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 TEAD4Q15561 434 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 DLG2Q15700 870 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 CCDC14Q49A88 953 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 ALS2CLQ60I27 953 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 DNAJC24Q6P3W2 148 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 BNIPLQ7Z465 357 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 CPNE8Q86YQ8 564 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 RHOT1Q8IXI2 618 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 ZNF683Q8IZ20 524 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 ATP11CQ8NB49 1132 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 C3orf20Q8ND61 904 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 DEFB124Q8NES8 71 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 JOSD2Q8TAC2 188 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 FRS2Q8WU20 508 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 OR8D1Q8WZ84 308 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 BIRC7Q96CA5 298 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 ZYG11BQ9C0D3 744 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 NEUROG2Q9H2A3 272 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 OR12D3Q9UGF7 316 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 SERGEFQ9UGK8 458 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 AMACRQ9UHK6 382 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 FZD4Q9ULV1 537 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 NFU1Q9UMS0 254 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 FARP1Q9Y4F1 1045 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-214ENST00000554604 OR51B4Q9Y5P0 310 aa12.68□□□□□ -0.38
SHMT2-214ENST00000554604 IGLV3-10A0A075B6K4 115 aa12.67□□□□□ -0.38
SHMT2-214ENST00000554604 TMEM191CA6NGB0 347 aa12.67□□□□□ -0.38
SHMT2-214ENST00000554604 SIGLEC16A6NMB1 481 aa12.67□□□□□ -0.38
SHMT2-214ENST00000554604 H3BQF6 201 aa12.67□□□□□ -0.38
SHMT2-214ENST00000554604 GIPC1O14908 333 aa12.67□□□□□ -0.38
SHMT2-214ENST00000554604 GOT1P17174 413 aa12.67□□□□□ -0.38
SHMT2-214ENST00000554604 DESP17661 470 aa12.67□□□□□ -0.38
SHMT2-214ENST00000554604 GPD1P21695 349 aa12.67□□□□□ -0.38
SHMT2-214ENST00000554604 CD27P26842 260 aa12.67□□□□□ -0.38
SHMT2-214ENST00000554604 RFC1P35251 1148 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-214ENST00000554604 ADRA1BP35368 520 aa12.67□□□□□ -0.38
SHMT2-214ENST00000554604 CSNK1EP49674 416 aaKnown RBP12.67□□□□□ -0.38
SHMT2-214ENST00000554604 VASPP50552 380 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-214ENST00000554604 DRG2P55039 364 aaKnown RBP12.67□□□□□ -0.38
SHMT2-214ENST00000554604 DR1Q01658 176 aa12.67□□□□□ -0.38
SHMT2-214ENST00000554604 ZNF252P-AS1Q0IIN9 211 aa12.67□□□□□ -0.38
SHMT2-214ENST00000554604 SIX1Q15475 284 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-214ENST00000554604 RAB6CQ53S08 254 aa12.67□□□□□ -0.38
SHMT2-214ENST00000554604 HSP90B2PQ58FF3 399 aa12.67□□□□□ -0.38
SHMT2-214ENST00000554604 PPP1R15BQ5SWA1 713 aa12.67□□□□□ -0.38
SHMT2-214ENST00000554604 FAM46CQ5VWP2 391 aa12.67□□□□□ -0.38
SHMT2-214ENST00000554604 KIAA0895LQ68EN5 471 aa12.67□□□□□ -0.38
SHMT2-214ENST00000554604 RWDD4Q6NW29 188 aaKnown RBP12.67□□□□□ -0.38
SHMT2-214ENST00000554604 AADACL2Q6P093 401 aa12.67□□□□□ -0.38
SHMT2-214ENST00000554604 NCEH1Q6PIU2 408 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms