RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 NETO2Q8NC67 525 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 ISG20Q96AZ6 181 aaKnown RBP12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 CNDP2Q96KP4 475 aaKnown RBP12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 CNPY3Q9BT09 278 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 SYT11Q9BT88 431 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 KLC2Q9H0B6 622 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 NOL6Q9H6R4 1146 aaKnown RBP12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 CAAP1Q9H8G2 361 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 HPCAL4Q9UM19 191 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 ADAMTS20P59510 1910 aa12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 LRRC53A6NM62 1247 aa12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 C16orf96A6NNT2 1141 aa12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 SMTNL1A8MU46 457 aa12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 KRIT1O00522 736 aa12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 BUB1O43683 1085 aa12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 KDELR3O43731 214 aa12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 CREB3O43889 395 aa12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 MAGEC1O60732 1142 aa12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 SDC3O75056 442 aa12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 EPHB2P29323 1055 aa12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 AKT2P31751 481 aa12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 GEMIN4P57678 1058 aaKnown RBP12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 OGDHQ02218 1023 aa12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 SMAD1Q15797 465 aaKnown RBP12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 ATXN7L2Q5T6C5 722 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 SFMBT2Q5VUG0 894 aa12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 CAVIN1Q6NZI2 390 aaKnown RBP12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 DNAAF5Q86Y56 855 aa12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 PLPP6Q8IY26 295 aa12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 RTL3Q8N8U3 475 aaKnown RBP12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 OR13H1Q8NG92 308 aa12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 VOPP1Q96AW1 172 aa12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 NAP1L5Q96NT1 182 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 FZD10Q9ULW2 581 aa12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 MYO6Q9UM54 1294 aa12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 FADS3Q9Y5Q0 445 aa12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 RP1P56715 2156 aa12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 SHROOM3Q8TF72 1996 aa12.09□□□□□ -0.47
TRAPPC6B-204ENST00000554018 CXorf51AA0A1B0GTR3 108 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 RAD51BO15315 384 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 ATMINO43313 823 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 PAK4O96013 591 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 GSRP00390 522 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 UGT2B4P06133 528 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 HNRNPA2B1P22626 353 aaKnown RBP12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 ABL2P42684 1182 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 CLDN6P56747 220 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 SNRPD1P62314 119 aaKnown RBP12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 RPS21P63220 83 aaKnown RBP12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 MAMLD1Q13495 774 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 FGL2Q14314 439 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 ASIC2Q16515 512 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 MYLK3Q32MK0 819 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 FILIP1LQ4L180 1135 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 E4F1Q66K89 784 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 GCNT7Q6ZNI0 430 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 ZNF571Q7Z3V5 609 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 TMC6Q7Z403 805 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 PROSER1Q86XN7 944 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 ZNF354CQ86Y25 554 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 GALNT15Q8N3T1 639 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 SLC25A45Q8N413 288 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 OR2AP1Q8NGE2 309 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 MDM1Q8TC05 714 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 HMCESQ96FZ2 354 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 VCPIP1Q96JH7 1222 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 FEM1CQ96JP0 617 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 EPAS1Q99814 870 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 CALN1Q9BXU9 219 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 SLC17A9Q9BYT1 436 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 CCDC86Q9H6F5 360 aaKnown RBP12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 KLHL11Q9NVR0 708 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 GPATCH2LQ9NWQ4 482 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 GGT7Q9UJ14 662 aa12.08□□□□□ -0.48
TRAPPC6B-204ENST00000554018 SMG1Q96Q15 3661 aaKnown RBP12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 A0A1B0GTH6 734 aa12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 POM121BA6NF01 834 aa12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 TRABD2BA6NFA1 517 aa12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 ZSCAN5CA6NGD5 496 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 IGLON5A6NGN9 336 aa12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 RASA4BC9J798 803 aa12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 TRIM38O00635 465 aa12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 RASA4O43374 803 aa12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 AP1G1O43747 822 aa12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 TMCC1O94876 653 aa12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 POP4O95707 220 aaKnown RBP12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 PSMA2P25787 234 aa12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 ACADVLP49748 655 aa12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 ZNF165P49910 485 aa12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 AIF1P55008 147 aa12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 SERINC3Q13530 473 aa12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 IQCB1Q15051 598 aa12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 ZNF805Q5CZA5 627 aa12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 ZNF542PQ5EBM4 170 aa12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 PLEKHA7Q6IQ23 1121 aa12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 KIAA1161Q6NSJ0 714 aa12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 Q6ZSR6 202 aa12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 ABI3BPQ7Z7G0 1075 aa12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 SLC22A18ASQ8N1D0 253 aa12.07□□□□□ -0.48
TRAPPC6B-204ENST00000554018 TSC1Q92574 1164 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms