RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 KRT3P12035 628 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 ITGB6P18564 788 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 NOS2P35228 1153 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 CTSOP43234 321 aaPredicted RBP7.91□□□□□ -1.14
ABCD4-220ENST00000553998 PSMD8P48556 350 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 PLK1P53350 603 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 DAB2P98082 770 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 MTA1Q13330 715 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 SLC12A1Q13621 1099 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 LINC00303Q3SY05 128 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 SETMARQ53H47 684 aaPredicted RBP7.91□□□□□ -1.14
ABCD4-220ENST00000553998 HS1BP3Q53T59 392 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 MS4A13Q5J8X5 152 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 CCDC122Q5T0U0 273 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 FAM102AQ5T9C2 384 aaPredicted RBP7.91□□□□□ -1.14
ABCD4-220ENST00000553998 AGBL4Q5VU57 503 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 KIAA1614Q5VZ46 1190 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 PLEKHA7Q6IQ23 1121 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 NEK5Q6P3R8 708 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 DNAJC24Q6P3W2 148 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.91□□□□□ -1.14
ABCD4-220ENST00000553998 CCDC112Q8NEF3 446 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 CLEC4CQ8WTT0 213 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 FRS2Q8WU20 508 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 EDEM1Q92611 657 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 SLC39A13Q96H72 371 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 APOLD1Q96LR9 279 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 BAG1Q99933 345 aaPredicted RBP7.91□□□□□ -1.14
ABCD4-220ENST00000553998 SEMA3CQ99985 751 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 DDX50Q9BQ39 737 aaKnown RBP7.91□□□□□ -1.14
ABCD4-220ENST00000553998 DUSP23Q9BVJ7 150 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 SELENOOQ9BVL4 669 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 PREBQ9HCU5 417 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 MRPL47Q9HD33 250 aaKnown RBP7.91□□□□□ -1.14
ABCD4-220ENST00000553998 LUC7LQ9NQ29 371 aaKnown RBP7.91□□□□□ -1.14
ABCD4-220ENST00000553998 PARVAQ9NVD7 372 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 TMEM59LQ9UK28 342 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 INTUQ9ULD6 942 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 PPM1HQ9ULR3 514 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 STAP1Q9ULZ2 295 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 SCINQ9Y6U3 715 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 TEX15Q9BXT5 2789 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 NEMP2A6NFY4 417 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 TMCO5BA8MYB1 307 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 EIF3CLB5ME19 914 aaKnown RBP7.9□□□□□ -1.14
ABCD4-220ENST00000553998 GOLGA8SH3BPF8 625 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 K7ESM1 405 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 SUV39H1O43463 412 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 NRDCO43847 1150 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 PIAS2O75928 621 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 LUC7L3O95232 432 aaKnown RBP7.9□□□□□ -1.14
ABCD4-220ENST00000553998 IPO7O95373 1038 aaKnown RBP7.9□□□□□ -1.14
ABCD4-220ENST00000553998 MOCS3O95396 460 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 LCA5LO95447 670 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 F9P00740 461 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 IL1BP01584 269 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 ITGB2P05107 769 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 CYP1A2P05177 515 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 H2AFZP0C0S5 128 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 THEGLP0DJG4 465 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 ALPPL2P10696 532 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 DESP17661 470 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 RRM1P23921 792 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 RBMS1P29558 406 aaKnown RBP7.9□□□□□ -1.14
ABCD4-220ENST00000553998 METAP1P53582 386 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 TAS2R38P59533 333 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 RPS24P62847 133 aaKnown RBP7.9□□□□□ -1.14
ABCD4-220ENST00000553998 SULT2A1Q06520 285 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 CLN3Q13286 438 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 MAMLD1Q13495 774 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 TAF5Q15542 800 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 C2CD6Q53TS8 623 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 DCAF6Q58WW2 860 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 FAM46CQ5VWP2 391 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 CCDC81Q6ZN84 652 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 H2AFVQ71UI9 128 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 ABI3BPQ7Z7G0 1075 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 DEFB106AQ8N104 65 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 TPCN2Q8NHX9 752 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 FAM174AQ8TBP5 190 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 DQX1Q8TE96 717 aaKnown RBP7.9□□□□□ -1.14
ABCD4-220ENST00000553998 FNIP1Q8TF40 1166 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 NT5C3BQ969T7 300 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 ZNF653Q96CK0 615 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 PGAP3Q96FM1 320 aaPredicted RBP7.9□□□□□ -1.14
ABCD4-220ENST00000553998 PDLIM2Q96JY6 352 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 FCRL2Q96LA5 508 aaPredicted RBP7.9□□□□□ -1.14
ABCD4-220ENST00000553998 EIF3CQ99613 913 aaKnown RBP7.9□□□□□ -1.14
ABCD4-220ENST00000553998 ABCG4Q9H172 646 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 GPR27Q9NS67 375 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.9□□□□□ -1.14
ABCD4-220ENST00000553998 STIM2Q9P246 746 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 CNOT8Q9UFF9 292 aaKnown RBP7.9□□□□□ -1.14
ABCD4-220ENST00000553998 LCMT1Q9UIC8 334 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 SARDHQ9UL12 918 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 SATB2Q9UPW6 733 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 NAALADL1Q9UQQ1 740 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 ENTPD2Q9Y5L3 495 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 CSNK1G3Q9Y6M4 447 aa7.9□□□□□ -1.14
ABCD4-220ENST00000553998 FLNCQ14315 2725 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms