RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 ECT2LQ008S8 904 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 TOB2Q14106 344 aaPredicted RBP5.31□□□□□ -1.56
CKAP4-203ENST00000553039 PTK2BQ14289 1009 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 LRRC14Q15048 493 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 SPRED3Q2MJR0 410 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 FBXW10Q5XX13 1052 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 ZNF720Q7Z2F6 126 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 ABI3BPQ7Z7G0 1075 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 B3GNT8Q7Z7M8 397 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 PARGQ86W56 976 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 FAM217AQ8IXS0 508 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 SYCP3Q8IZU3 236 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 STK40Q8N2I9 435 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 FIBINQ8TAL6 211 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 CHAC2Q8WUX2 184 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 PMM1Q92871 262 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 HVCN1Q96D96 273 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 FEM1CQ96JP0 617 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 TBATAQ96M53 351 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 ACCSQ96QU6 501 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 SPAG5Q96R06 1193 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 DDX50Q9BQ39 737 aaKnown RBP5.31□□□□□ -1.56
CKAP4-203ENST00000553039 SLC13A1Q9BZW2 595 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 MTMR12Q9C0I1 747 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 RBSNQ9H1K0 784 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 TRIT1Q9H3H1 467 aaKnown RBP5.31□□□□□ -1.56
CKAP4-203ENST00000553039 MTG2Q9H4K7 406 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 CAAP1Q9H8G2 361 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 CSNK1G1Q9HCP0 422 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 PDE11AQ9HCR9 933 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 TMEM30AQ9NV96 361 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 FOXJ2Q9P0K8 574 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 MARCH2Q9P0N8 246 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 RASAL2Q9UJF2 1139 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 ERRFI1Q9UJM3 462 aaPredicted RBP5.31□□□□□ -1.56
CKAP4-203ENST00000553039 ERVW-1Q9UQF0 538 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 TP53TG5Q9Y2B4 290 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 CA5BQ9Y2D0 317 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 PCDHGA3Q9Y5H0 932 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 SCN1AP35498 2009 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 LRRK1Q38SD2 2015 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 BOD1L1Q8NFC6 3051 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 NPHP3-ACAD11A0A0J9YXS1 232 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 A0A1W2PQU0 124 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 TTC34A8MYJ7 566 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 J3QL48 77 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 MDM4O15151 490 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 YY2O15391 372 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 IRAK2O43187 625 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 SLC26A4O43511 780 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 PFKFB2O60825 505 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 LRCH4O75427 683 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 PCDH8O95206 1070 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 LATS1O95835 1130 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 FAM200BP0CF97 657 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 RNF224P0DH78 156 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 PRKAR1AP10644 381 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 IDEP14735 1019 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 ACPPP15309 386 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 PNLIPP16233 465 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 ITIH1P19827 911 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 NME2P22392 152 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 HOXD9P28356 352 aaPredicted RBP5.3□□□□□ -1.56
CKAP4-203ENST00000553039 ATICP31939 592 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 MAN1A1P33908 653 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 UGT1A3P35503 534 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 CSKP41240 450 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 BLKP51451 505 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 ZNF131P52739 623 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 PDX1P52945 283 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 EPHB1P54762 984 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 HDAC4P56524 1084 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 PLAURQ03405 335 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 SULT2A1Q06520 285 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 SGCGQ13326 291 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 ARHGEF7Q14155 803 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 FZD2Q14332 565 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 ELOCQ15369 112 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 INPP5JQ15735 1006 aaPredicted RBP5.3□□□□□ -1.56
CKAP4-203ENST00000553039 CLPPQ16740 277 aaPredicted RBP5.3□□□□□ -1.56
CKAP4-203ENST00000553039 ZRANB3Q5FWF4 1079 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 TTC38Q5R3I4 469 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 HYIQ5T013 277 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 PHF19Q5T6S3 580 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 FAXCQ5TGI0 409 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 MRM1Q6IN84 353 aaKnown RBP5.3□□□□□ -1.56
CKAP4-203ENST00000553039 C6orf15Q6UXA7 325 aaPredicted RBP5.3□□□□□ -1.56
CKAP4-203ENST00000553039 GK5Q6ZS86 529 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 PAQR9Q6ZVX9 377 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 TRAPPC11Q7Z392 1133 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 KCNK18Q7Z418 384 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 FAM35AQ86V20 835 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 PIM3Q86V86 326 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 HORMAD1Q86X24 394 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 UNC45BQ8IWX7 931 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 SLC35F3Q8IY50 421 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 MMP21Q8N119 569 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 CRYBG2Q8N1P7 616 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 FSTL5Q8N475 847 aaPredicted RBP5.3□□□□□ -1.56
CKAP4-203ENST00000553039 C4orf32Q8N8J7 132 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms