RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 AWAT2Q6E213 333 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 TMEM154Q6P9G4 183 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 CCDC174Q6PII3 467 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 TMTC3Q6ZXV5 915 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 INTS8Q75QN2 995 aaKnown RBP3.44□□□□□ -1.86
CCNT1-203ENST00000550457 KRT26Q7Z3Y9 468 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 PEX26Q7Z412 305 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 PHLDB2Q86SQ0 1253 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 ERICH1Q86X53 443 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 NELFCDQ8IXH7 590 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 KLHL7Q8IXQ5 586 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 RNF168Q8IYW5 571 aaPredicted RBP3.44□□□□□ -1.86
CCNT1-203ENST00000550457 TTC5Q8N0Z6 440 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 ARHGAP24Q8N264 748 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 CBARPQ8N350 705 aaPredicted RBP3.44□□□□□ -1.86
CCNT1-203ENST00000550457 NME8Q8N427 588 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 RIBC1Q8N443 379 aaPredicted RBP3.44□□□□□ -1.86
CCNT1-203ENST00000550457 FAM109AQ8N4B1 249 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 C4orf32Q8N8J7 132 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 LRRC57Q8N9N7 239 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 LRRC8CQ8TDW0 803 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 DENND1AQ8TEH3 1009 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 CKAP2Q8WWK9 683 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 CTNNBL1Q8WYA6 563 aaPredicted RBP3.44□□□□□ -1.86
CCNT1-203ENST00000550457 PPP2R3CQ969Q6 453 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 AZIN2Q96A70 460 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 RGMAQ96B86 450 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 FAM136AQ96C01 138 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 ZNF653Q96CK0 615 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 MS4A14Q96JA4 679 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 MPHOSPH6Q99547 160 aaKnown RBP3.44□□□□□ -1.86
CCNT1-203ENST00000550457 PRMT1Q99873 361 aaKnown RBP3.44□□□□□ -1.86
CCNT1-203ENST00000550457 SELENOSQ9BQE4 189 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 CCDC77Q9BR77 488 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 SPRTNQ9H040 489 aaPredicted RBP3.44□□□□□ -1.86
CCNT1-203ENST00000550457 NAPBQ9H115 298 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 CARD9Q9H257 536 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 BLZF1Q9H2G9 400 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 TMEM60Q9H2L4 133 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 NLRC4Q9NPP4 1024 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 DDX43Q9NXZ2 648 aaKnown RBP3.44□□□□□ -1.86
CCNT1-203ENST00000550457 NKIRAS1Q9NYS0 192 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 SENP1Q9P0U3 644 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 ZNF212Q9UDV6 495 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 SEC63Q9UGP8 760 aaKnown RBP3.44□□□□□ -1.86
CCNT1-203ENST00000550457 PCYOX1Q9UHG3 505 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 DDX25Q9UHL0 483 aaKnown RBP3.44□□□□□ -1.86
CCNT1-203ENST00000550457 LNPEPQ9UIQ6 1025 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 HDAC9Q9UKV0 1011 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 PNMA2Q9UL42 364 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 BLOC1S6Q9UL45 172 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 AGAP1Q9UPQ3 857 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 ZNF148Q9UQR1 794 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 WDR37Q9Y2I8 494 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 TBC1D30Q9Y2I9 924 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 GDAQ9Y2T3 454 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 USH1CQ9Y6N9 552 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 LAMA4Q16363 1823 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 C10orf71Q711Q0 1435 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 ADAMTS13Q76LX8 1427 aa3.44□□□□□ -1.86
CCNT1-203ENST00000550457 ZSCAN5CA6NGD5 496 aaPredicted RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 ZNF785A8K8V0 405 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 MIF4GDA9UHW6 222 aaKnown RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 TCP11X1B4DZS4 312 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 PRRT4C9JH25 899 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 F8W8V4 182 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 H0YIZ8 118 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 NDC80O14777 642 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 PPEF2O14830 753 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 CETN3O15182 167 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 NCK2O43639 380 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 PCDHGA12O60330 932 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 PEX11AO75192 247 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 E2F6O75461 281 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 JTBO76095 146 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 TJP3O95049 919 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 FTCDO95954 541 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 AFPP02771 609 aaKnown RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 ATP5BP06576 529 aaKnown RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 CSF1RP07333 972 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 GJB1P08034 283 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 PLEKP08567 350 aaPredicted RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 H2AFZP0C0S5 128 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 PIM1P11309 404 aaPredicted RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 SCG2P13521 617 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 MALP21145 153 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 PTPN4P29074 926 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 RANBP1P43487 201 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 PTDSS1P48651 473 aaKnown RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 ACADVLP49748 655 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 POLGP54098 1239 aaPredicted RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 FOXG1P55316 489 aaPredicted RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 POLE2P56282 527 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 FKBP3Q00688 224 aaKnown RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 GFPT1Q06210 699 aaPredicted RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 SLC34A1Q06495 639 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 SULT2A1Q06520 285 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 KLRC3Q07444 240 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 KLHL30Q0D2K2 578 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 AP1B1Q10567 949 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms