RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 RENBPP51606 427 aa13.23□□□□□ -0.29
RAB5C-206ENST00000550406 SNRPD1P62314 119 aaKnown RBP13.23□□□□□ -0.29
RAB5C-206ENST00000550406 CSTF1Q05048 431 aaKnown RBP13.23□□□□□ -0.29
RAB5C-206ENST00000550406 NIPAL4Q0D2K0 466 aa13.23□□□□□ -0.29
RAB5C-206ENST00000550406 SNX1Q13596 522 aa13.23□□□□□ -0.29
RAB5C-206ENST00000550406 NUMA1Q14980 2115 aa13.23□□□□□ -0.29
RAB5C-206ENST00000550406 CCNG2Q16589 344 aa13.23□□□□□ -0.29
RAB5C-206ENST00000550406 TEX44Q53QW1 395 aa13.23□□□□□ -0.29
RAB5C-206ENST00000550406 ARSIQ5FYB1 569 aa13.23□□□□□ -0.29
RAB5C-206ENST00000550406 SRLQ86TD4 932 aa13.23□□□□□ -0.29
RAB5C-206ENST00000550406 MMAAQ8IVH4 418 aaKnown RBP13.23□□□□□ -0.29
RAB5C-206ENST00000550406 CAMKK1Q8N5S9 505 aa13.23□□□□□ -0.29
RAB5C-206ENST00000550406 TSTD1Q8NFU3 115 aa13.23□□□□□ -0.29
RAB5C-206ENST00000550406 ARRDC2Q8TBH0 407 aa13.23□□□□□ -0.29
RAB5C-206ENST00000550406 HMGB4Q8WW32 186 aa13.23□□□□□ -0.29
RAB5C-206ENST00000550406 HTR3CQ8WXA8 447 aa13.23□□□□□ -0.29
RAB5C-206ENST00000550406 NELL1Q92832 810 aa13.23□□□□□ -0.29
RAB5C-206ENST00000550406 HEPHQ9BQS7 1158 aa13.23□□□□□ -0.29
RAB5C-206ENST00000550406 CD93Q9NPY3 652 aa13.23□□□□□ -0.29
RAB5C-206ENST00000550406 SEPT10Q9P0V9 454 aa13.23□□□□□ -0.29
RAB5C-206ENST00000550406 LRRK1Q38SD2 2015 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 ALOX15BO15296 676 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 ZBTB24O43167 697 aaPredicted RBP13.22□□□□□ -0.29
RAB5C-206ENST00000550406 GALR2O43603 387 aaPredicted RBP13.22□□□□□ -0.29
RAB5C-206ENST00000550406 LEFTY1O75610 366 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 POP4O95707 220 aaKnown RBP13.22□□□□□ -0.29
RAB5C-206ENST00000550406 IGSF6O95976 241 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 MMP2P08253 660 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 GDF10P55107 478 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 ELAVL3Q14576 367 aaKnown RBP13.22□□□□□ -0.29
RAB5C-206ENST00000550406 ZNF235Q14590 738 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 ALG1LQ6GMV1 187 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 ANO7Q6IWH7 933 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 DARS2Q6PI48 645 aaKnown RBP13.22□□□□□ -0.29
RAB5C-206ENST00000550406 NCEH1Q6PIU2 408 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 CACUL1Q86Y37 369 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 ZNF567Q8N184 647 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 TMIEQ8NEW7 156 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 PIP4K2CQ8TBX8 421 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 NSMCE1Q8WV22 266 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 OR8D1Q8WZ84 308 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 NKD2Q969F2 451 aaPredicted RBP13.22□□□□□ -0.29
RAB5C-206ENST00000550406 ARRDC3Q96B67 414 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 CAPZA3Q96KX2 299 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 TEKT5Q96M29 485 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 GDAP1L1Q96MZ0 367 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 AGAP3Q96P47 875 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 AP1M1Q9BXS5 423 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 CPEB1Q9BZB8 566 aaKnown RBP13.22□□□□□ -0.29
RAB5C-206ENST00000550406 NOD2Q9HC29 1040 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 IL36AQ9UHA7 158 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 FBXO4Q9UKT5 387 aa13.22□□□□□ -0.29
RAB5C-206ENST00000550406 PGRMC1O00264 195 aaKnown RBP13.21□□□□□ -0.29
RAB5C-206ENST00000550406 PLK4O00444 970 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 KRIT1O00522 736 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 MID1O15344 667 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 SP9P0CG40 484 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 KCNJ1P48048 391 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 PSMD8P48556 350 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 FNTBP49356 437 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 SCNN1BP51168 640 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 DSC2Q02487 901 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 ANGPT1Q15389 498 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 CST6Q15828 149 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 CYP1B1Q16678 543 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 KCTD19Q17RG1 926 aaPredicted RBP13.21□□□□□ -0.29
RAB5C-206ENST00000550406 POM121L1PQ3SYA9 428 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 ZNF776Q68DI1 518 aaPredicted RBP13.21□□□□□ -0.29
RAB5C-206ENST00000550406 HEATR6Q6AI08 1181 aaKnown RBP13.21□□□□□ -0.29
RAB5C-206ENST00000550406 TTC27Q6P3X3 843 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 DRICH1Q6PGQ1 229 aaPredicted RBP13.21□□□□□ -0.29
RAB5C-206ENST00000550406 CAMK1DQ8IU85 385 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 CDKL3Q8IVW4 592 aaPredicted RBP13.21□□□□□ -0.29
RAB5C-206ENST00000550406 RYBPQ8N488 228 aaPredicted RBP13.21□□□□□ -0.29
RAB5C-206ENST00000550406 AADATQ8N5Z0 425 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 FRMD1Q8N878 549 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 GRIN3AQ8TCU5 1115 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 MAIP1Q8WWC4 291 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 SIPA1Q96FS4 1042 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 NUDCD1Q96RS6 583 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 SEMA3CQ99985 751 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 TMEM121Q9BTD3 319 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 FRMD8P1Q9BZ68 369 aaPredicted RBP13.21□□□□□ -0.29
RAB5C-206ENST00000550406 TPSD1Q9BZJ3 242 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 ZDHHC6Q9H6R6 413 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 FBRSQ9HAH7 460 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 SERGEFQ9UGK8 458 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 AMACRQ9UHK6 382 aa13.21□□□□□ -0.29
RAB5C-206ENST00000550406 DRG1Q9Y295 367 aaKnown RBP13.21□□□□□ -0.29
RAB5C-206ENST00000550406 KCNN4O15554 427 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 ALDH1A2O94788 518 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 PIGNO95427 931 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 IL1BP01584 269 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 ETS1P14921 441 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 SLC8A1P32418 973 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 DRD3P35462 400 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 HSPA9P38646 679 aaKnown RBP13.2□□□□□ -0.3
RAB5C-206ENST00000550406 RECQLP46063 649 aaPredicted RBP13.2□□□□□ -0.3
RAB5C-206ENST00000550406 NUBP1P53384 320 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 ITKQ08881 620 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms