RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 HNRNPA2B1P22626 353 aaKnown RBP7.79□□□□□ -1.16
NEK3-201ENST00000550331 AKT2P31751 481 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 MTIF2P46199 727 aaKnown RBP7.79□□□□□ -1.16
NEK3-201ENST00000550331 GABRB2P47870 512 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 SULT1E1P49888 294 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 CLDN6P56747 220 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 UBE2HP62256 183 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 E2F1Q01094 437 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 ZNF211Q13398 564 aaPredicted RBP7.79□□□□□ -1.16
NEK3-201ENST00000550331 MAN2A1Q16706 1144 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 ZNF284Q2VY69 593 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 SLC25A52Q3SY17 297 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 POM121L1PQ3SYA9 428 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 ALFQ53S48 1182 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 HS1BP3Q53T59 392 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 TAF1BQ53T94 588 aaPredicted RBP7.79□□□□□ -1.16
NEK3-201ENST00000550331 LRRC31Q6UY01 552 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 ZNF783Q6ZMS7 281 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 HORMAD1Q86X24 394 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 FAM114A1Q8IWE2 563 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 FAM71AQ8IYT1 594 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 CCDC116Q8IYX3 515 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 DCBLD1Q8N8Z6 715 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 IFT43Q96FT9 208 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 PPP1R16AQ96I34 528 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 HDAC8Q9BY41 377 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 SIK2Q9H0K1 926 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 CLMPQ9H6B4 373 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 ANLNQ9NQW6 1124 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 DYRK4Q9NR20 520 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 KLHL11Q9NVR0 708 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 IL36AQ9UHA7 158 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 AJAP1Q9UKB5 411 aaPredicted RBP7.79□□□□□ -1.16
NEK3-201ENST00000550331 MKL2Q9ULH7 1088 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 PLXNA2O75051 1894 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 A0A0D9SEW6 157 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 SCO2A0A1W2PP80 73 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 ILVBLA1L0T0 632 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 PYCARD-AS1I3L0S3 204 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 K7ERQ8 282 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 FOXN3O00409 490 aaPredicted RBP7.78□□□□□ -1.16
NEK3-201ENST00000550331 TRIM38O00635 465 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 SIGLEC6O43699 453 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 SNAP91O60641 907 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 SDC3O75056 442 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 LSM8O95777 96 aaKnown RBP7.78□□□□□ -1.16
NEK3-201ENST00000550331 PNMA6AP0CW24 399 aaPredicted RBP7.78□□□□□ -1.16
NEK3-201ENST00000550331 CYP11B1P15538 503 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 PRLRP16471 622 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 TFE3P19532 575 aaPredicted RBP7.78□□□□□ -1.16
NEK3-201ENST00000550331 GLDCP23378 1020 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 DGKAP23743 735 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 RRM1P23921 792 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 COL8A1P27658 744 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 OR1E1P30953 314 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 RECQLP46063 649 aaPredicted RBP7.78□□□□□ -1.16
NEK3-201ENST00000550331 CXADRP78310 365 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 DEUP1Q05D60 604 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 SLC20A2Q08357 652 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 CCDC173Q0VFZ6 552 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 CAMK4Q16566 473 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 TPD52L1Q16890 204 aaPredicted RBP7.78□□□□□ -1.16
NEK3-201ENST00000550331 TMEM259Q4ZIN3 620 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 VWA3BQ502W6 1294 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 C4orf48Q5BLP8 95 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 LCE1DQ5T752 114 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 FAM102AQ5T9C2 384 aaPredicted RBP7.78□□□□□ -1.16
NEK3-201ENST00000550331 KIAA1161Q6NSJ0 714 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 RETSATQ6NUM9 610 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 C22orf39Q6P5X5 142 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 PCSK4Q6UW60 755 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 ERN2Q76MJ5 926 aaKnown RBP7.78□□□□□ -1.16
NEK3-201ENST00000550331 ARCQ7LC44 396 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 BNIPLQ7Z465 357 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 ABI3BPQ7Z7G0 1075 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 ZSCAN30Q86W11 494 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 BPHLQ86WA6 291 aaPredicted RBP7.78□□□□□ -1.16
NEK3-201ENST00000550331 ERICH1Q86X53 443 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 XYLT1Q86Y38 959 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 SLC25A45Q8N413 288 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 PCDH20Q8N6Y1 951 aaKnown RBP7.78□□□□□ -1.16
NEK3-201ENST00000550331 MSANTD4Q8NCY6 345 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 OR4C6Q8NH72 309 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 GRIN3AQ8TCU5 1115 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 ARRDC3Q96B67 414 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 C18orf8Q96DM3 657 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 HAPLN3Q96S86 360 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 TBCBQ99426 244 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 CEP44Q9C0F1 390 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 PDCL3Q9H2J4 239 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 NDST4Q9H3R1 872 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 PLCB1Q9NQ66 1216 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 GPR27Q9NS67 375 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 PPARGC1AQ9UBK2 798 aaKnown RBP7.78□□□□□ -1.16
NEK3-201ENST00000550331 CA5BQ9Y2D0 317 aa7.78□□□□□ -1.16
NEK3-201ENST00000550331 NEMP2A6NFY4 417 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 A6NNZ2 444 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 ERVH48-1M5A8F1 160 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 SLC31A1O15431 190 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 SMAD6O43541 496 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms