RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 CFAP58Q5T655 872 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 ANKRD20A1Q5TYW2 823 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 ANKRD20A3Q5VUR7 823 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 EGFLAMQ63HQ2 1017 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 C8orf74Q6P047 294 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 MAMSTRQ6ZN01 415 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 SYT13Q7L8C5 426 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 BMP8AQ7Z5Y6 402 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 SPEM1Q8N4L4 309 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 PAF1Q8N7H5 531 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 FAM71DQ8N9W8 422 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 CYB5D2Q8WUJ1 264 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 ATG4AQ8WYN0 398 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 RUBCNQ92622 972 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 CLDN23Q96B33 292 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 RPL10LQ96L21 214 aaKnown RBP9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 MRGPRX3Q96LB0 322 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 ZNF641Q96N77 438 aaPredicted RBP9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 HEPHQ9BQS7 1158 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 TMEM121Q9BTD3 319 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 FRMD8Q9BZ67 464 aaPredicted RBP9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 CHRDQ9H2X0 955 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 LMAN1LQ9HAT1 526 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 USP29Q9HBJ7 922 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 GLOD4Q9HC38 313 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 NT5MQ9NPB1 228 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 DYRK4Q9NR20 520 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 RSPH14Q9UHP6 348 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 TTLL3Q9Y4R7 772 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 ANKRD36A6QL64 1941 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 TMEM221A6NGB7 291 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 E7EVH7 732 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 M0R296 226 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 TRIM24O15164 1050 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 INSIG1O15503 277 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 GALR2O43603 387 aaPredicted RBP9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 KLF8O95600 359 aaPredicted RBP9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 PEX11BO96011 259 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 VAV1P15498 845 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 GLDCP23378 1020 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 CTSOP43234 321 aaPredicted RBP9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 STK19P49842 368 aaPredicted RBP9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 CCR3P51677 355 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 SEC13P55735 322 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 RPL26P61254 145 aaKnown RBP9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 BCL2L1Q07817 233 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 SLC10A7Q0GE19 358 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 WASHC5Q12768 1159 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 CAMK2GQ13555 558 aaPredicted RBP9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 PTK6Q13882 451 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 CYTH1Q15438 398 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 MYLK3Q32MK0 819 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 TTC31Q49AM3 519 aaPredicted RBP9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 ARMC3Q5W041 872 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 ZNF776Q68DI1 518 aaPredicted RBP9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 LINGO4Q6UY18 593 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 PPP1R21Q6ZMI0 780 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 ARHGAP36Q6ZRI8 547 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 CEP128Q6ZU80 1094 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 SRLQ86TD4 932 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 LINC00523Q86TU6 105 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 ZNF567Q8N184 647 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 RYBPQ8N488 228 aaPredicted RBP9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 MMGT1Q8N4V1 131 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 IL17RCQ8NAC3 791 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 TSEN2Q8NCE0 465 aaKnown RBP9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 TMIEQ8NEW7 156 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 RPLP0P6Q8NHW5 317 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 FRS2Q8WU20 508 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 AGAP3Q96P47 875 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 FCRL5Q96RD9 977 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 KRT12Q99456 494 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 FSD1LQ9BXM9 530 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 ADGRE3Q9BY15 652 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 DDX47Q9H0S4 455 aaKnown RBP9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 EIF2B3Q9NR50 452 aaKnown RBP9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 RBM12Q9NTZ6 932 aaKnown RBP9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 HECAQ9UBI9 543 aaPredicted RBP9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 IL36AQ9UHA7 158 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 ASIC3Q9UHC3 531 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 FAM153AQ9UHL3 310 aa9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 RPL26L1Q9UNX3 145 aaKnown RBP9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 FCF1Q9Y324 198 aaKnown RBP9.9□□□□□ -0.82
SMARCD1-206ENST00000549274 ATG2BQ96BY7 2078 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 PDE2AO00408 941 aaPredicted RBP9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 PAPSS2O95340 614 aaPredicted RBP9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 MT-CO1P00395 513 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 EPOP01588 193 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 KRT14P02533 472 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 HLA-DQB2P05538 268 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 TUBBP07437 444 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 C7P10643 843 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 AOC1P19801 751 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 CR2P20023 1033 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 MLLT3P42568 568 aaPredicted RBP9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 IL12RB1P42701 662 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 LMAN1P49257 510 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 SCNN1BP51168 640 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 CCNHP51946 323 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms