RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 NEK11Q8NG66 645 aa14.33□□□□□ -0.12
PTCH1-217ENST00000548420 FAM149B1Q96BN6 582 aa14.33□□□□□ -0.12
PTCH1-217ENST00000548420 ABHD17AQ96GS6 310 aa14.33□□□□□ -0.12
PTCH1-217ENST00000548420 FCRL2Q96LA5 508 aaPredicted RBP14.33□□□□□ -0.12
PTCH1-217ENST00000548420 OMDQ99983 421 aa14.33□□□□□ -0.12
PTCH1-217ENST00000548420 SLC2A11Q9BYW1 496 aa14.33□□□□□ -0.12
PTCH1-217ENST00000548420 CBX8Q9HC52 389 aa14.33□□□□□ -0.12
PTCH1-217ENST00000548420 NLRC4Q9NPP4 1024 aa14.33□□□□□ -0.12
PTCH1-217ENST00000548420 SEPT10Q9P0V9 454 aa14.33□□□□□ -0.12
PTCH1-217ENST00000548420 CEP83Q9Y592 693 aa14.33□□□□□ -0.12
PTCH1-217ENST00000548420 CCDC168Q8NDH2 2452 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 TBC1D3DA0A087WVF3 549 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 TBC1D3IA0A087WXS9 549 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 TBC1D3EA0A087X179 549 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 TBC1D3KA0A087X1G2 549 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 A0A1B0GTH6 734 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 TBC1D3FA6NER0 549 aaPredicted RBP14.32□□□□□ -0.12
PTCH1-217ENST00000548420 TBC1D3LB9A6J9 549 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 K7EM74 188 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 MAGEC1O60732 1142 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 GFPT2O94808 682 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 CYP1A1P04798 512 aaPredicted RBP14.32□□□□□ -0.12
PTCH1-217ENST00000548420 MMEP08473 750 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 TBC1D3HP0C7X1 549 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 ALPPL2P10696 532 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 NR1D1P20393 614 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 HOXD9P28356 352 aaPredicted RBP14.32□□□□□ -0.12
PTCH1-217ENST00000548420 SLC8A1P32418 973 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 SCNN1AP37088 669 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 STAT1P42224 750 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 TBX4P57082 545 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 ZNF445P59923 1031 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 CDR2Q01850 454 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 SLC6A3Q01959 620 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 STAT4Q14765 748 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 NUGGCQ68CJ6 796 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 TBC1D3GQ6DHY5 549 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 TBC1D3CQ6IPX1 549 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 FAM183BPQ6ZVS7 135 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 TBC1D3Q8IZP1 549 aaPredicted RBP14.32□□□□□ -0.12
PTCH1-217ENST00000548420 TPCN2Q8NHX9 752 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 KLHDC7BQ96G42 594 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 SERPINB11Q96P15 392 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 PREBQ9HCU5 417 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 SUN2Q9UH99 717 aa14.32□□□□□ -0.12
PTCH1-217ENST00000548420 PRR19A6NJB7 356 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 NTN3O00634 580 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-217ENST00000548420 IRAK2O43187 625 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 ACSL4O60488 711 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 DIAPH2O60879 1101 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 HSF2BPO75031 334 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 VPS4BO75351 444 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 DDAH2O95865 285 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 TRUB2O95900 331 aaKnown RBP14.31□□□□□ -0.12
PTCH1-217ENST00000548420 DLDP09622 509 aaKnown RBP14.31□□□□□ -0.12
PTCH1-217ENST00000548420 GOT1P17174 413 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 ITIH1P19827 911 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 ETV5P41161 510 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 METAP1P53582 386 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 NOMO3P69849 1222 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 PITX1P78337 314 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-217ENST00000548420 FMO1Q01740 532 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 KLRB1Q12918 225 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 NR1I3Q14994 352 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 MPPE1Q53F39 396 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 FAM133BQ5BKY9 247 aaKnown RBP14.31□□□□□ -0.12
PTCH1-217ENST00000548420 MPP7Q5T2T1 576 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 C9orf64Q5T6V5 341 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 TAF3Q5VWG9 929 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 MBLAC2Q68D91 279 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 OR6B2Q6IFH4 312 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 PRPF39Q86UA1 669 aaKnown RBP14.31□□□□□ -0.12
PTCH1-217ENST00000548420 TAC4Q86UU9 113 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 GALNT11Q8NCW6 608 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 DDI1Q8WTU0 396 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 SLC20A1Q8WUM9 679 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 JPH3Q8WXH2 748 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-217ENST00000548420 NT5C3BQ969T7 300 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 MOCOSQ96EN8 888 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 NAP1L5Q96NT1 182 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-217ENST00000548420 SPAG5Q96R06 1193 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 FAM129BQ96TA1 746 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 EPB41L5Q9HCM4 733 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 ABCB8Q9NUT2 735 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 PISDQ9UG56 409 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 VPS4AQ9UN37 437 aa14.31□□□□□ -0.12
PTCH1-217ENST00000548420 NIPBLQ6KC79 2804 aaeCLIP14.3□□□□□ -0.12
PTCH1-217ENST00000548420 A0A1W2PQC6 194 aa14.3□□□□□ -0.12
PTCH1-217ENST00000548420 NOS2P35228 1153 aa14.3□□□□□ -0.12
PTCH1-217ENST00000548420 DRD3P35462 400 aa14.3□□□□□ -0.12
PTCH1-217ENST00000548420 SLC11A2P49281 568 aa14.3□□□□□ -0.12
PTCH1-217ENST00000548420 DCAF6Q58WW2 860 aa14.3□□□□□ -0.12
PTCH1-217ENST00000548420 PIK3R6Q5UE93 754 aa14.3□□□□□ -0.12
PTCH1-217ENST00000548420 NADSYN1Q6IA69 706 aa14.3□□□□□ -0.12
PTCH1-217ENST00000548420 ZCCHC8Q6NZY4 707 aaKnown RBP14.3□□□□□ -0.12
PTCH1-217ENST00000548420 SND1Q7KZF4 910 aaKnown RBP eCLIP14.3□□□□□ -0.12
PTCH1-217ENST00000548420 ARCQ7LC44 396 aa14.3□□□□□ -0.12
PTCH1-217ENST00000548420 XYLT1Q86Y38 959 aa14.3□□□□□ -0.12
PTCH1-217ENST00000548420 DEFB106AQ8N104 65 aa14.3□□□□□ -0.12
PTCH1-217ENST00000548420 SLC22A18ASQ8N1D0 253 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms