RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 PDE7BQ9NP56 450 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 PCDHB16Q9NRJ7 776 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-210ENST00000547654 RCE1Q9Y256 329 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 PEG3Q9GZU2 1588 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 CACNA1IQ9P0X4 2223 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 DIP2BQ9P265 1576 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 M0QYT0 321 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 PSMA7O14818 248 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 SYN3O14994 580 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 BCAT2O15382 392 aaPredicted RBP4.5□□□□□ -1.69
SCAF11-210ENST00000547654 NKX2-8O15522 239 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 CBFA2T3O75081 653 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 CSPG5O95196 566 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 QDPRP09417 244 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 COX7A2P14406 83 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 ATF7P17544 494 aaPredicted RBP4.5□□□□□ -1.69
SCAF11-210ENST00000547654 ATP6V1E1P36543 226 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 UFM1P61960 85 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 UBXN2AP68543 259 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 PRAMEP78395 509 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 AIMP2Q13155 320 aaKnown RBP4.5□□□□□ -1.69
SCAF11-210ENST00000547654 COG2Q14746 738 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 KYNUQ16719 465 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 TCP11X2Q5H9J9 407 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 PCID2Q5JVF3 399 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 KRTAP5-4Q6L8H1 288 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 MIS18BP1Q6P0N0 1132 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 KLHL35Q6PF15 583 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 MTHFD1LQ6UB35 978 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 IL27RAQ6UWB1 636 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 NAPRTQ6XQN6 538 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 MFSD6Q6ZSS7 791 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 PARS2Q7L3T8 475 aaKnown RBP4.5□□□□□ -1.69
SCAF11-210ENST00000547654 MON1AQ86VX9 555 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 ZDHHC17Q8IUH5 632 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 KIAA2013Q8IYS2 634 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 ADGRF2Q8IZF7 708 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 LINC01465Q8N7H1 131 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 NANOGP1Q8N7R0 232 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 RSPH1Q8WYR4 309 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 ARHGEF2Q92974 986 aaKnown RBP4.5□□□□□ -1.69
SCAF11-210ENST00000547654 R3HDM4Q96D70 268 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 VPS50Q96JG6 964 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 NCAPGQ9BPX3 1015 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 C17orf80Q9BSJ5 609 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 HTATIP2Q9BUP3 242 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 KRTAP4-4Q9BYR3 166 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 KCNK9Q9NPC2 374 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 PDGFCQ9NRA1 345 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 TRNAU1APQ9NX07 287 aaKnown RBP4.5□□□□□ -1.69
SCAF11-210ENST00000547654 GAR1Q9NY12 217 aaKnown RBP4.5□□□□□ -1.69
SCAF11-210ENST00000547654 WWOXQ9NZC7 414 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 SEL1LQ9UBV2 794 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 NKX1-2Q9UD57 310 aaPredicted RBP4.5□□□□□ -1.69
SCAF11-210ENST00000547654 ANAPC5Q9UJX4 755 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 GTF3C4Q9UKN8 822 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 ADAMTS5Q9UNA0 930 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 PCDHGB5Q9Y5G0 923 aa4.5□□□□□ -1.69
SCAF11-210ENST00000547654 TSPOAP1O95153 1857 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 IGKV2D-30A0A075B6S6 120 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 CYP2D7A0A087X1C5 515 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 FAM90A7PA6NKC0 464 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 FAM90A22PA8MWA6 464 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 FAM90A12PA8MX19 464 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 FAM90A23PA8MXZ1 464 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 H0Y626 953 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 GRM8O00222 908 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 PSMD9O00233 223 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 SOCS2O14508 198 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 PDE8BO95263 885 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 SLU7O95391 586 aaKnown RBP4.49□□□□□ -1.69
SCAF11-210ENST00000547654 TGDSO95455 350 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 GGPS1O95749 300 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 ALDOAP04075 364 aaKnown RBP4.49□□□□□ -1.69
SCAF11-210ENST00000547654 EIF2S1P05198 315 aaKnown RBP4.49□□□□□ -1.69
SCAF11-210ENST00000547654 ALADP13716 330 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 MMP8P22894 467 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 MCM3P25205 808 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 HOXC13P31276 330 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 GARSP41250 739 aaKnown RBP4.49□□□□□ -1.69
SCAF11-210ENST00000547654 CLK1P49759 484 aaKnown RBP4.49□□□□□ -1.69
SCAF11-210ENST00000547654 MRPL12P52815 198 aaKnown RBP4.49□□□□□ -1.69
SCAF11-210ENST00000547654 RPL15P61313 204 aaKnown RBP4.49□□□□□ -1.69
SCAF11-210ENST00000547654 OLR1P78380 273 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 RBP5P82980 135 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 TLE3Q04726 772 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 BFSP1Q12934 665 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 TRIP6Q15654 476 aaKnown RBP4.49□□□□□ -1.69
SCAF11-210ENST00000547654 NTRK2Q16620 822 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 SARM1Q6SZW1 724 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 KIRREL2Q6UWL6 708 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 CHSY1Q86X52 802 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 CEP97Q8IW35 865 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 IZUMO1Q8IYV9 350 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 C8orf58Q8NAV2 365 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 MGARPQ8TDB4 240 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 NCSTNQ92542 709 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 NPIPB3Q92617 1050 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms